Pseudomonas coronafaciens pv. coronafaciens strain ICMP 4329

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas coronafaciens pv. coronafaciens strain ICMP 4329 is a bacterial strain characterized by a single replicon. This strain is notably associated with the host plant Avena sativa, commonly known as oat. The genetic information for strain ICMP 4329 is available under the accession number RBSJ00000000.1. This accession provides insights into the genomic characteristics of the strain, which can be valuable for research in plant pathology and microbiology. The association of Pseudomonas coronafaciens pv. coronafaciens with Avena sativa suggests a potential role in the ecology of oat crops, possibly influencing plant health and disease dynamics. Understanding the interactions between this bacterial strain and its host can lead to improved management strategies in agriculture, particularly in dealing with diseases that affect oat production.

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Gammaproteobacteria
Order	Pseudomonadales
Family	Pseudomonadaceae
Genus	Pseudomonas
Species	Pseudomonas coronafaciens
Strain	pv. coronafaciens strain ICMP 4329

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Image source: Wikipedia/Wikimedia

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Avena sativa
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Pseudomonas coronafaciens pv. coronafaciens strain ICMP 4329

RBSJ00000000.1

Gene Summary

Adenine Count

1277497 bp

Thymine Count

1284329 bp

Guanine Count

1735858 bp

Cytosine Count

1719605 bp

Genome Length

6036360 bp

Protein-coding Genes

5099 genes

Non-Coding Genes

239 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
oxidoreductase zinc-binding protein	ALP72_03054	Not Available	Positive	5331628 - 5332647	35692.1
had family hydrolase	ALP72_03055	Not Available	Negative	5332667 - 5333320	24046.7
polyamine abc transporter atp-binding protein	ALP72_03056	Not Available	Negative	5333402 - 5334391	36428.2
hypothetical protein	ALP72_01287	Not Available	Negative	5335354 - 5336235	33051.8
carbohydrate-selective porin oprb	ALP72_04879	Not Available	Negative	5336339 - 5337709	50503.0
glucose abc transporter atp-binding protein	ALP72_01289	Not Available	Negative	5337833 - 5338993	42390.7
binding-protein dependent transport system inner membrane protein	ALP72_01290	Not Available	Negative	5338996 - 5339841	30492.0
glucose abc transporter permease	ALP72_01291	Not Available	Negative	5339834 - 5340742	33680.0
glucose abc transport system, periplasmic sugar-binding protein	ALP72_101195	Not Available	Negative	5340842 - 5342128	45698.4
sensor histidine kinase	ALP72_01292	Not Available	Negative	5342299 - 5343735	53381.8