Pseudomonas coronafaciens pv. coronafaciens strain ICMP 4329

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas coronafaciens pv. coronafaciens strain ICMP 4329 is a bacterial strain characterized by a single replicon. This strain is notably associated with the host plant Avena sativa, commonly known as oat. The genetic information for strain ICMP 4329 is available under the accession number RBSJ00000000.1. This accession provides insights into the genomic characteristics of the strain, which can be valuable for research in plant pathology and microbiology. The association of Pseudomonas coronafaciens pv. coronafaciens with Avena sativa suggests a potential role in the ecology of oat crops, possibly influencing plant health and disease dynamics. Understanding the interactions between this bacterial strain and its host can lead to improved management strategies in agriculture, particularly in dealing with diseases that affect oat production.

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Gammaproteobacteria
Order	Pseudomonadales
Family	Pseudomonadaceae
Genus	Pseudomonas
Species	Pseudomonas coronafaciens
Strain	pv. coronafaciens strain ICMP 4329

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Image source: Wikipedia/Wikimedia

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Avena sativa
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Pseudomonas coronafaciens pv. coronafaciens strain ICMP 4329

RBSJ00000000.1

Gene Summary

Adenine Count

1277497 bp

Thymine Count

1284329 bp

Guanine Count

1735858 bp

Cytosine Count

1719605 bp

Genome Length

6036360 bp

Protein-coding Genes

5099 genes

Non-Coding Genes

239 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
hypothetical protein	ALP72_01743	Not Available	Positive	3611977 - 3612996	35603.8
glycosyl transferase, family 39	ALP72_100536	Not Available	Positive	3613053 - 3614759	62878.2
putative 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arnf	ALP72_01744	Not Available	Negative	3615977 - 3616411	15785.8
putative 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arne	ALP72_01745	Not Available	Negative	3616408 - 3616752	12437.1
undecaprenyl phosphate-alpha-4-amino-4-deoxy-l-arabinose arabinosyl transferase	ALP72_04997	Not Available	Negative	3616749 - 3618419	62708.7
putative 4-deoxy-4-formamido-l-arabinose-phosphoundecaprenol deformylase arnd	ALP72_01747	Not Available	Negative	3618398 - 3619279	32444.9
bifunctional udp-glucuronic acid decarboxylase/udp-4-amino-4-deoxy-l-arabinose formyltransferase	ALP72_01748	Not Available	Negative	3619279 - 3621270	74109.5
glycosyl transferase protein	ALP72_01749	Not Available	Negative	3621267 - 3622280	37597.7
udp-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferase	ALP72_01750	Not Available	Negative	3622277 - 3623425	41915.5
fad dependent oxidoreductase	ALP72_01751	Not Available	Positive	3623996 - 3625321	47408.9