Pseudomonas coronafaciens pv. coronafaciens strain ICMP 4329

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas coronafaciens pv. coronafaciens strain ICMP 4329 is a bacterial strain characterized by a single replicon. This strain is notably associated with the host plant Avena sativa, commonly known as oat. The genetic information for strain ICMP 4329 is available under the accession number RBSJ00000000.1. This accession provides insights into the genomic characteristics of the strain, which can be valuable for research in plant pathology and microbiology. The association of Pseudomonas coronafaciens pv. coronafaciens with Avena sativa suggests a potential role in the ecology of oat crops, possibly influencing plant health and disease dynamics. Understanding the interactions between this bacterial strain and its host can lead to improved management strategies in agriculture, particularly in dealing with diseases that affect oat production.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas coronafaciens
Strainpv. coronafaciens strain ICMP 4329

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas coronafaciens pv. coronafaciens strain ICMP 4329
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Avena sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas coronafaciens pv. coronafaciens strain ICMP 4329

Gene Summary

Adenine Count

1277497 bp

Thymine Count

1284329 bp

Guanine Count

1735858 bp

Cytosine Count

1719605 bp

Genome Length

6036360 bp

Protein-coding Genes

5099 genes

Non-Coding Genes

239 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
giy-yig nuclease super proteinALP72_02356Not AvailablePositive3464997 - 346533812415.9
putative glutathione s-transferase-related proteinALP72_02357Not AvailablePositive3465375 - 346633435037.1
glutaredoxinALP72_02358Not AvailableNegative3466392 - 346674213170.1
nucleoid-associated proteinALP72_02359Not AvailableNegative3466748 - 346774937400.1
hu family dna-binding protein hu-nuALP72_02360Not AvailablePositive3468142 - 34684239801.98
ribosomal rna large subunit methyltransferase fALP72_02361Not AvailableNegative3468559 - 346954536257.6
valine--trna ligaseALP72_05119Not AvailableNegative3469691 - 3472639111135.0
yd repeat-containing proteinALP72_02363Not AvailablePositive3472650 - 347377440953.8
hypothetical proteinALP72_05121Not AvailableNegative3473818 - 347439921536.2
dna polymerase iii subunit chiALP72_02365Not AvailableNegative3474278 - 347470616150.1

Displaying genes 3211 – 3220 of 5338 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.