Pseudomonas coronafaciens pv. coronafaciens strain ICMP 4329

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas coronafaciens pv. coronafaciens strain ICMP 4329 is a bacterial strain characterized by a single replicon. This strain is notably associated with the host plant Avena sativa, commonly known as oat. The genetic information for strain ICMP 4329 is available under the accession number RBSJ00000000.1. This accession provides insights into the genomic characteristics of the strain, which can be valuable for research in plant pathology and microbiology. The association of Pseudomonas coronafaciens pv. coronafaciens with Avena sativa suggests a potential role in the ecology of oat crops, possibly influencing plant health and disease dynamics. Understanding the interactions between this bacterial strain and its host can lead to improved management strategies in agriculture, particularly in dealing with diseases that affect oat production.

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Gammaproteobacteria
Order	Pseudomonadales
Family	Pseudomonadaceae
Genus	Pseudomonas
Species	Pseudomonas coronafaciens
Strain	pv. coronafaciens strain ICMP 4329

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Image source: Wikipedia/Wikimedia

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Avena sativa
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Pseudomonas coronafaciens pv. coronafaciens strain ICMP 4329

RBSJ00000000.1

Gene Summary

Adenine Count

1277497 bp

Thymine Count

1284329 bp

Guanine Count

1735858 bp

Cytosine Count

1719605 bp

Genome Length

6036360 bp

Protein-coding Genes

5099 genes

Non-Coding Genes

239 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
high affinity branched-chain amino acid abc transporter atp-binding protein	ALP72_00087	Not Available	Negative	2645321 - 2646196	32344.4
high-affinity branched-chain amino acid abc transporter permease brae	ALP72_00088	Not Available	Negative	2646193 - 2647506	47177.3
inner-membrane translocator	ALP72_00089	Not Available	Negative	2647509 - 2648423	32555.9
high affinity branched-chain amino acid abc transporter periplasmic amino acid-binding protein	ALP72_04551	Not Available	Negative	2648586 - 2649764	41362.4
regulatory protein, lysr substrate-binding protein	ALP72_00091	Not Available	Positive	2650218 - 2651123	34551.5
nicotinate phosphoribosyltransferase	ALP72_00092	Not Available	Positive	2651223 - 2652446	46611.4
nh synthetase	ALP72_00093	Not Available	Positive	2652473 - 2653303	29912.6
blue copper domain-containing protein	ALP72_00094	Not Available	Negative	2653458 - 2653925	16793.3
transglutaminase-like domain-containing protein	ALP72_00095	Not Available	Negative	2654059 - 2654952	33698.1
hypothetical protein	ALP72_04552	Not Available	Negative	2654952 - 2657495	94495.9