Pseudomonas coronafaciens pv. coronafaciens strain ICMP 4329

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas coronafaciens pv. coronafaciens strain ICMP 4329 is a bacterial strain characterized by a single replicon. This strain is notably associated with the host plant Avena sativa, commonly known as oat. The genetic information for strain ICMP 4329 is available under the accession number RBSJ00000000.1. This accession provides insights into the genomic characteristics of the strain, which can be valuable for research in plant pathology and microbiology. The association of Pseudomonas coronafaciens pv. coronafaciens with Avena sativa suggests a potential role in the ecology of oat crops, possibly influencing plant health and disease dynamics. Understanding the interactions between this bacterial strain and its host can lead to improved management strategies in agriculture, particularly in dealing with diseases that affect oat production.

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Gammaproteobacteria
Order	Pseudomonadales
Family	Pseudomonadaceae
Genus	Pseudomonas
Species	Pseudomonas coronafaciens
Strain	pv. coronafaciens strain ICMP 4329

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Image source: Wikipedia/Wikimedia

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Avena sativa
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Pseudomonas coronafaciens pv. coronafaciens strain ICMP 4329

RBSJ00000000.1

Gene Summary

Adenine Count

1277497 bp

Thymine Count

1284329 bp

Guanine Count

1735858 bp

Cytosine Count

1719605 bp

Genome Length

6036360 bp

Protein-coding Genes

5099 genes

Non-Coding Genes

239 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
binding-protein dependent transport system inner membrane protein	ALP72_01349	Not Available	Negative	1973146 - 1974156	36932.3
dipeptide abc transporter periplasmic dipeptide-binding protein	ALP72_101094	Not Available	Negative	1974231 - 1975874	60857.7
oprd family outer membrane protein	ALP72_01350	Not Available	Negative	1975910 - 1977289	50668.2
dipeptide abc transporter periplasmic dipeptide-binding protein	ALP72_04890	Not Available	Negative	1977441 - 1979036	59523.8
dipeptide abc transporter periplasmic dipeptide-binding protein	ALP72_01352	Not Available	Negative	1979351 - 1981000	61408.1
peptide abc transporter periplasmic peptide-binding protein	ALP72_04891	Not Available	Negative	1981238 - 1982872	60742.1
phca	ALP72_01354	Not Available	Negative	1982940 - 1984481	57193.9
hypothetical protein	ALP72_01355	Not Available	Negative	1984687 - 1985400	25628.7
sensor histidine kinase	ALP72_01356	Not Available	Positive	1985593 - 1986852	46425.5
abc transporter	ALP72_01357	Not Available	Positive	1987449 - 1989233	67225.8