Pseudomonas coronafaciens pv. coronafaciens strain ICMP 4329

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas coronafaciens pv. coronafaciens strain ICMP 4329 is a bacterial strain characterized by a single replicon. This strain is notably associated with the host plant Avena sativa, commonly known as oat. The genetic information for strain ICMP 4329 is available under the accession number RBSJ00000000.1. This accession provides insights into the genomic characteristics of the strain, which can be valuable for research in plant pathology and microbiology. The association of Pseudomonas coronafaciens pv. coronafaciens with Avena sativa suggests a potential role in the ecology of oat crops, possibly influencing plant health and disease dynamics. Understanding the interactions between this bacterial strain and its host can lead to improved management strategies in agriculture, particularly in dealing with diseases that affect oat production.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas coronafaciens
Strainpv. coronafaciens strain ICMP 4329

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas coronafaciens pv. coronafaciens strain ICMP 4329
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Avena sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas coronafaciens pv. coronafaciens strain ICMP 4329

Gene Summary

Adenine Count

1277497 bp

Thymine Count

1284329 bp

Guanine Count

1735858 bp

Cytosine Count

1719605 bp

Genome Length

6036360 bp

Protein-coding Genes

5099 genes

Non-Coding Genes

239 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyoverdine sidechain peptide synthetase iv, d-asp-l-ser componentALP72_04970Not AvailableNegative834985 - 839375161179.0
pyoverdine sidechain peptide synthetase iii, l-thr-l-ser componentALP72_04973Not AvailableNegative839356 - 843067136668.0
lipopolysaccharide kinaseALP72_04117Not AvailableNegative843582 - 84431628759.4
lipopolysaccharide core heptose kinase rfapALP72_04118Not AvailableNegative844316 - 84512230754.2
lipopolysaccharide core biosynthesis protein waagALP72_04119Not AvailableNegative845122 - 84624342232.0
lipopolysaccharide heptosyltransferase iALP72_04120Not AvailableNegative846243 - 84730739380.6
adp-heptose:lps heptosyltransferase iiALP72_04121Not AvailableNegative847310 - 84834438062.3
hypothetical proteinALP72_100879Not AvailablePositive848261 - 8484316504.8
glutamate-ammonia-ligase adenylyltransferaseALP72_05529Not AvailableNegative848473 - 851430110716.0
pyruvate dehydrogenase subunit e1ALP72_05531Not AvailablePositive851623 - 854460106105.0

Displaying genes 1011 – 1020 of 5338 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.