Pseudomonas savastanoi pv. fraxini strain ICMP 9129

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas savastanoi pv. fraxini strain ICMP 9129 is a Gram-negative, mesophilic bacterium that exhibits a rod shape and is characterized by its aerobic metabolism and heterotrophic energy source. This strain is motile, possessing flagella, and typically exists as single cells rather than in clusters. It has a temperature range with an optimal growth temperature of 28°C. This bacterium is known to have a free-living biotic relationship and primarily associates with the host plant Fraxinus excelsior, commonly known as the European ash. One significant health impact associated with this strain is the development of cankers on its host, which can lead to detrimental effects on the tree's health and longevity. Pseudomonas savastanoi pv. fraxini strain ICMP 9129 has a single replicon and is encapsulated by two membranes, a characteristic that is typical of Gram-negative bacteria. The diversity of its habitats suggests a versatile ecological presence, as it can thrive in various environments. The ability of this strain to cause cankers indicates a potential role in plant pathology, highlighting the importance of monitoring and managing its impact on agricultural and natural ecosystems where Fraxinus excelsior is present. Understanding this bacterium's interactions with its host could provide insights into disease management strategies for affected plant populations.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas savastanoi
Strainpv. fraxini strain ICMP 9129

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas savastanoi pv. fraxini strain ICMP 9129
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature28
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Fraxinus excelsior
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas savastanoi pv. fraxini strain ICMP 9129

Gene Summary

Adenine Count

1260128 bp

Thymine Count

1253808 bp

Guanine Count

1741294 bp

Cytosine Count

1743338 bp

Genome Length

6032353 bp

Protein-coding Genes

5466 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative dioxygenaseALP82_03761Not AvailableNegative1003203 - 100362815939.8
exopolysaccharide production protein exozALP82_03762Not AvailablePositive1003860 - 100520351157.5
oxidoreductase ylbeALP82_03763Not AvailablePositive1005285 - 100594122580.2
putative proteinh:flavin oxidoreductaseALP82_05320Not AvailableNegative1005958 - 100705539611.7
transcriptional regulator, lysr familyALP82_03765Not AvailablePositive1007195 - 100760214293.4
abc-type dipeptide transport system, periplasmic componentALP82_03766Not AvailablePositive1007931 - 100956260145.1
permease component of an abc superfamily dipeptide/oligopeptide/nickel transporterALP82_03767Not AvailablePositive1009559 - 101050934079.1
dipeptide transport system permease proteinALP82_03768Not AvailablePositive1010514 - 101144632563.2
abc transporter, atp-binding proteinALP82_03769Not AvailablePositive1011443 - 101308659659.4
solute-binding component of an abc superfamily transporterALP82_03770Not AvailablePositive1013330 - 101420230710.8

Displaying genes 971 – 980 of 5544 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
CankersCausesPMC8815115

Displaying health effects 1 – 1 of 1 in total