Pseudomonas savastanoi pv. fraxini strain ICMP 9129

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas savastanoi pv. fraxini strain ICMP 9129 is a Gram-negative, mesophilic bacterium that exhibits a rod shape and is characterized by its aerobic metabolism and heterotrophic energy source. This strain is motile, possessing flagella, and typically exists as single cells rather than in clusters. It has a temperature range with an optimal growth temperature of 28°C. This bacterium is known to have a free-living biotic relationship and primarily associates with the host plant Fraxinus excelsior, commonly known as the European ash. One significant health impact associated with this strain is the development of cankers on its host, which can lead to detrimental effects on the tree's health and longevity. Pseudomonas savastanoi pv. fraxini strain ICMP 9129 has a single replicon and is encapsulated by two membranes, a characteristic that is typical of Gram-negative bacteria. The diversity of its habitats suggests a versatile ecological presence, as it can thrive in various environments. The ability of this strain to cause cankers indicates a potential role in plant pathology, highlighting the importance of monitoring and managing its impact on agricultural and natural ecosystems where Fraxinus excelsior is present. Understanding this bacterium's interactions with its host could provide insights into disease management strategies for affected plant populations.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas savastanoi
Strainpv. fraxini strain ICMP 9129

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas savastanoi pv. fraxini strain ICMP 9129
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature28
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Fraxinus excelsior
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas savastanoi pv. fraxini strain ICMP 9129

Gene Summary

Adenine Count

1260128 bp

Thymine Count

1253808 bp

Guanine Count

1741294 bp

Cytosine Count

1743338 bp

Genome Length

6032353 bp

Protein-coding Genes

5466 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative proteinh-ubiquinone oxidoreductase chain jALP82_03028Not AvailableNegative5698526 - 569903517998.6
putative proteinh-quinone oxidoreductase subunit iALP82_03029Not AvailableNegative5699046 - 569959420505.7
putative proteinh-quinone oxidoreductase subunit hALP82_03030Not AvailableNegative5699606 - 570061337430.4
putative proteinh-ubiquinone oxidoreductase chain gALP82_05129Not AvailableNegative5700610 - 570332798562.7
hypothetical proteinALP82_103169Not AvailableNegative5703464 - 570482248857.7
putative proteinh:ubiquinone oxidoreductase, subunit eALP82_03032Not AvailableNegative5704819 - 570531617908.4
putative proteinh-quinone oxidoreductase subunit c/dALP82_03033Not AvailableNegative5705319 - 570710067760.2
putative proteinh-quinone oxidoreductase subunit bALP82_03034Not AvailableNegative5707175 - 570785525657.9
putative proteinh-quinone oxidoreductase subunit aALP82_03035Not AvailableNegative5707860 - 570827315143.8
isocitrate lyaseALP82_05131Not AvailableNegative5708737 - 571013451465.6

Displaying genes 5281 – 5290 of 5544 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
CankersCausesPMC8815115

Displaying health effects 1 – 1 of 1 in total