Pseudomonas savastanoi pv. fraxini strain ICMP 9129

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas savastanoi pv. fraxini strain ICMP 9129 is a Gram-negative, mesophilic bacterium that exhibits a rod shape and is characterized by its aerobic metabolism and heterotrophic energy source. This strain is motile, possessing flagella, and typically exists as single cells rather than in clusters. It has a temperature range with an optimal growth temperature of 28°C. This bacterium is known to have a free-living biotic relationship and primarily associates with the host plant Fraxinus excelsior, commonly known as the European ash. One significant health impact associated with this strain is the development of cankers on its host, which can lead to detrimental effects on the tree's health and longevity. Pseudomonas savastanoi pv. fraxini strain ICMP 9129 has a single replicon and is encapsulated by two membranes, a characteristic that is typical of Gram-negative bacteria. The diversity of its habitats suggests a versatile ecological presence, as it can thrive in various environments. The ability of this strain to cause cankers indicates a potential role in plant pathology, highlighting the importance of monitoring and managing its impact on agricultural and natural ecosystems where Fraxinus excelsior is present. Understanding this bacterium's interactions with its host could provide insights into disease management strategies for affected plant populations.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas savastanoi
Strainpv. fraxini strain ICMP 9129

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas savastanoi pv. fraxini strain ICMP 9129
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature28
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Fraxinus excelsior
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas savastanoi pv. fraxini strain ICMP 9129

Gene Summary

Adenine Count

1260128 bp

Thymine Count

1253808 bp

Guanine Count

1741294 bp

Cytosine Count

1743338 bp

Genome Length

6032353 bp

Protein-coding Genes

5466 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome oxidase bioproteinsis protein cox11-ctagALP82_03159Not AvailablePositive4862508 - 486299618206.3
sco1/senc proteinALP82_03160Not AvailablePositive4863033 - 486369223888.2
d-methionine-binding lipoprotein metqALP82_05156Not AvailableNegative4863927 - 486476630246.5
methionine abc transporter permease proteinALP82_03162Not AvailableNegative4864750 - 486542424145.5
methionine import atp-binding protein metnALP82_03163Not AvailableNegative4865424 - 486643136755.4
catalaseALP82_03164Not AvailablePositive4866738 - 486888878941.2
putative lipoproteinALP82_05158Not AvailableNegative4868995 - 486972026270.7
zinc abc transporter, inner membrane permease protein znubALP82_03166Not AvailableNegative4869750 - 487053827453.1
zinc import atp-binding protein znucALP82_03167Not AvailableNegative4870531 - 487132828778.9
putative zinc uptake regulation proteinALP82_100074Not AvailableNegative4871328 - 487181017107.6

Displaying genes 4511 – 4520 of 5544 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
CankersCausesPMC8815115

Displaying health effects 1 – 1 of 1 in total