Pseudomonas savastanoi pv. fraxini strain ICMP 9129

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas savastanoi pv. fraxini strain ICMP 9129 is a Gram-negative, mesophilic bacterium that exhibits a rod shape and is characterized by its aerobic metabolism and heterotrophic energy source. This strain is motile, possessing flagella, and typically exists as single cells rather than in clusters. It has a temperature range with an optimal growth temperature of 28°C. This bacterium is known to have a free-living biotic relationship and primarily associates with the host plant Fraxinus excelsior, commonly known as the European ash. One significant health impact associated with this strain is the development of cankers on its host, which can lead to detrimental effects on the tree's health and longevity. Pseudomonas savastanoi pv. fraxini strain ICMP 9129 has a single replicon and is encapsulated by two membranes, a characteristic that is typical of Gram-negative bacteria. The diversity of its habitats suggests a versatile ecological presence, as it can thrive in various environments. The ability of this strain to cause cankers indicates a potential role in plant pathology, highlighting the importance of monitoring and managing its impact on agricultural and natural ecosystems where Fraxinus excelsior is present. Understanding this bacterium's interactions with its host could provide insights into disease management strategies for affected plant populations.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas savastanoi
Strainpv. fraxini strain ICMP 9129

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas savastanoi pv. fraxini strain ICMP 9129
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature28
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Fraxinus excelsior
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas savastanoi pv. fraxini strain ICMP 9129

Gene Summary

Adenine Count

1260128 bp

Thymine Count

1253808 bp

Guanine Count

1741294 bp

Cytosine Count

1743338 bp

Genome Length

6032353 bp

Protein-coding Genes

5466 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylmuramate--l-alanine ligaseALP82_02995Not AvailableNegative4007086 - 400854652684.6
udp-n-acetylglucosamine--n-acetylmuramyl- pyrophosphoryl-undecaprenol n-acetylglucosamine transferaseALP82_02996Not AvailableNegative4008539 - 400960937832.2
lipid ii flippase ftswALP82_02997Not AvailableNegative4009599 - 401081344054.9
udp-n-acetylmuramoylalanine--d-glutamate ligaseALP82_02998Not AvailableNegative4010810 - 401215648097.7
phospho-n-acetylmuramoyl-pentapeptide- transferaseALP82_02999Not AvailableNegative4012162 - 401324439434.6
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseALP82_05120Not AvailableNegative4013244 - 401470450537.0
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseALP82_03001Not AvailableNegative4014607 - 401607052068.1
penicillin-binding proteinALP82_05121Not AvailableNegative4016070 - 401789066332.0
ribosomal rna small subunit methyltransferase hALP82_03003Not AvailableNegative4018087 - 401902834169.0
protein mrazALP82_03004Not AvailableNegative4019031 - 401948617180.8

Displaying genes 3691 – 3700 of 5544 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
CankersCausesPMC8815115

Displaying health effects 1 – 1 of 1 in total