Pseudomonas savastanoi pv. fraxini strain ICMP 9129

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas savastanoi pv. fraxini strain ICMP 9129 is a Gram-negative, mesophilic bacterium that exhibits a rod shape and is characterized by its aerobic metabolism and heterotrophic energy source. This strain is motile, possessing flagella, and typically exists as single cells rather than in clusters. It has a temperature range with an optimal growth temperature of 28°C. This bacterium is known to have a free-living biotic relationship and primarily associates with the host plant Fraxinus excelsior, commonly known as the European ash. One significant health impact associated with this strain is the development of cankers on its host, which can lead to detrimental effects on the tree's health and longevity. Pseudomonas savastanoi pv. fraxini strain ICMP 9129 has a single replicon and is encapsulated by two membranes, a characteristic that is typical of Gram-negative bacteria. The diversity of its habitats suggests a versatile ecological presence, as it can thrive in various environments. The ability of this strain to cause cankers indicates a potential role in plant pathology, highlighting the importance of monitoring and managing its impact on agricultural and natural ecosystems where Fraxinus excelsior is present. Understanding this bacterium's interactions with its host could provide insights into disease management strategies for affected plant populations.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas savastanoi
Strainpv. fraxini strain ICMP 9129

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas savastanoi pv. fraxini strain ICMP 9129
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature28
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Fraxinus excelsior
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas savastanoi pv. fraxini strain ICMP 9129

Gene Summary

Adenine Count

1260128 bp

Thymine Count

1253808 bp

Guanine Count

1741294 bp

Cytosine Count

1743338 bp

Genome Length

6032353 bp

Protein-coding Genes

5466 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative lipoproteinALP82_01975Not AvailablePositive3465193 - 34654539195.57
branched-chain amino acid transport system carrier proteinALP82_01976Not AvailableNegative3465561 - 34657556614.27
branched-chain amino acid transport system ii carrier proteinALP82_01977Not AvailableNegative3465697 - 346687240203.2
succinyl-coa ligase subunit alphaALP82_01978Not AvailableNegative3467244 - 346812530093.6
succinyl-coa ligase subunit betaALP82_01979Not AvailableNegative3468125 - 346929141214.7
dihydrolipoyl dehydrogenaseALP82_04872Not AvailableNegative3469500 - 347093650089.5
dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complexALP82_01981Not AvailableNegative3471107 - 347234242981.8
2-oxoglutarate dehydrogenase e1 componentALP82_01982Not AvailableNegative3472384 - 3475215106491.0
succinate dehydrogenase iron-sulfur proteinALP82_01983Not AvailableNegative3475475 - 347618826555.2
succinate dehydrogenase, flavoprotein subunitALP82_01984Not AvailableNegative3476192 - 347796463415.4

Displaying genes 3181 – 3190 of 5544 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
CankersCausesPMC8815115

Displaying health effects 1 – 1 of 1 in total