Pseudomonas amygdali pv. ulmi strain ICMP 5931

RodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas amygdali pv. ulmi strain ICMP 5931 is a Gram-negative bacterium characterized by its rod-shaped morphology and mobility, which is indicative of its ability to move in various environments. This strain possesses a single replicon, allowing for efficient genetic regulation and replication. The strain is cataloged under the accession RBRS00000000.1, which serves as a reference for genetic and genomic studies. Pseudomonas amygdali pv. ulmi is known to be a pathogen affecting plants, specifically associated with diseases in various species. From an ecological perspective, the mobility of Pseudomonas amygdali pv. ulmi strain ICMP 5931 suggests that it may have a competitive advantage in colonizing plant surfaces or entering plant tissues. Its ability to move can facilitate the spread of disease within plant populations, impacting agricultural practices and crop yields. Understanding the traits of this strain can provide insights into its role in plant-pathogen interactions and its potential implications for managing plant health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas amygdali
Strainpv. ulmi strain ICMP 5931

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas amygdali pv. ulmi strain ICMP 5931
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas amygdali pv. ulmi strain ICMP 5931

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5621 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ispsy18, transposaseALP90_01440Not AvailablePositive4234805 - 423578436810.5
hypothetical proteinALP90_200149Not AvailablePositive4235848 - 42361119881.3
hypothetical proteinALP90_00754Not AvailablePositive4236340 - 423692822002.1
gaf:atp-binding region, atpase-like:histidine kinase aALP90_100817Not AvailableNegative4236976 - 423921382257.7
bacteriophytochrome heme oxygenase bphoALP90_00755Not AvailableNegative4239210 - 423982422543.2
sulfatase proteinALP90_04743Not AvailableNegative4240175 - 424228078792.4
hypothetical proteinALP90_00757Not AvailableNegative4242219 - 424283922722.6
bnr/asp-box repeat-containing proteinALP90_00758Not AvailableNegative4242836 - 424346222992.1
bnr/asp-box repeat proteinALP90_101741Not AvailableNegative4243230 - 424413532574.7
cytochrome proteinALP90_00759Not AvailableNegative4244174 - 424471920642.4

Displaying genes 3971 – 3980 of 5702 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.