Pseudomonas amygdali pv. ulmi strain ICMP 5931

RodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas amygdali pv. ulmi strain ICMP 5931 is a Gram-negative bacterium characterized by its rod-shaped morphology and mobility, which is indicative of its ability to move in various environments. This strain possesses a single replicon, allowing for efficient genetic regulation and replication. The strain is cataloged under the accession RBRS00000000.1, which serves as a reference for genetic and genomic studies. Pseudomonas amygdali pv. ulmi is known to be a pathogen affecting plants, specifically associated with diseases in various species. From an ecological perspective, the mobility of Pseudomonas amygdali pv. ulmi strain ICMP 5931 suggests that it may have a competitive advantage in colonizing plant surfaces or entering plant tissues. Its ability to move can facilitate the spread of disease within plant populations, impacting agricultural practices and crop yields. Understanding the traits of this strain can provide insights into its role in plant-pathogen interactions and its potential implications for managing plant health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas amygdali
Strainpv. ulmi strain ICMP 5931

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas amygdali pv. ulmi strain ICMP 5931
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas amygdali pv. ulmi strain ICMP 5931

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5621 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chemotaxis protein methyltransferase wspcALP90_00977Not AvailableNegative3590653 - 359193946485.5
chew domain-containing protein wspbALP90_00978Not AvailableNegative3591936 - 359247219963.2
methyl-accepting chemotaxis proteinALP90_00979Not AvailableNegative3592481 - 359410358704.6
leucine-rich repeat-containing proteinALP90_00980Not AvailablePositive3594394 - 3600363223685.0
putative membrane proteinALP90_00981Not AvailableNegative3600421 - 360117626433.4
sensory box histidine kinase/response regulatorALP90_00982Not AvailablePositive3601456 - 360355276755.3
putative xenobiotic reductaseALP90_04802Not AvailableNegative3603612 - 360476342295.1
single-stranded-dna-specific exonuclease recjALP90_04803Not AvailableNegative3604832 - 360663465761.6
yaeq protein familyALP90_00985Not AvailableNegative3606610 - 360744331422.4
hypothetical proteinALP90_04804Not AvailablePositive3607447 - 360832532768.8

Displaying genes 3361 – 3370 of 5702 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.