Pseudomonas amygdali pv. ulmi strain ICMP 5931

RodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas amygdali pv. ulmi strain ICMP 5931 is a Gram-negative bacterium characterized by its rod-shaped morphology and mobility, which is indicative of its ability to move in various environments. This strain possesses a single replicon, allowing for efficient genetic regulation and replication. The strain is cataloged under the accession RBRS00000000.1, which serves as a reference for genetic and genomic studies. Pseudomonas amygdali pv. ulmi is known to be a pathogen affecting plants, specifically associated with diseases in various species. From an ecological perspective, the mobility of Pseudomonas amygdali pv. ulmi strain ICMP 5931 suggests that it may have a competitive advantage in colonizing plant surfaces or entering plant tissues. Its ability to move can facilitate the spread of disease within plant populations, impacting agricultural practices and crop yields. Understanding the traits of this strain can provide insights into its role in plant-pathogen interactions and its potential implications for managing plant health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas amygdali
Strainpv. ulmi strain ICMP 5931

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas amygdali pv. ulmi strain ICMP 5931
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas amygdali pv. ulmi strain ICMP 5931

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5621 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sarcosine oxidase, beta subunitALP90_03167Not AvailablePositive3489619 - 349086945312.2
sarcosine oxidase, delta subunitALP90_03168Not AvailablePositive3490885 - 349118111467.5
sarcosine oxidase alpha subunitALP90_03169Not AvailablePositive3491178 - 3494198109503.0
sarcosine oxidase gamma subunitALP90_03170Not AvailablePositive3494250 - 349488223094.8
formyltetrahydrofolate deformylaseALP90_03171Not AvailablePositive3495133 - 349599032141.5
glutathione-independent formaldehyde dehydrogenaseALP90_03172Not AvailablePositive3495926 - 349723946268.8
hypothetical proteinALP90_200199Not AvailableNegative3497410 - 34975806095.26
hypothetical proteinALP90_200047Not AvailableNegative3497804 - 34980499271.91
hypothetical proteinALP90_02425Not AvailableNegative3498196 - 349849211277.4
stability/partitioning determinantALP90_05124Not AvailablePositive3498772 - 34989817596.01

Displaying genes 3261 – 3270 of 5702 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.