Pseudomonas amygdali pv. ulmi strain ICMP 5931

RodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas amygdali pv. ulmi strain ICMP 5931 is a Gram-negative bacterium characterized by its rod-shaped morphology and mobility, which is indicative of its ability to move in various environments. This strain possesses a single replicon, allowing for efficient genetic regulation and replication. The strain is cataloged under the accession RBRS00000000.1, which serves as a reference for genetic and genomic studies. Pseudomonas amygdali pv. ulmi is known to be a pathogen affecting plants, specifically associated with diseases in various species. From an ecological perspective, the mobility of Pseudomonas amygdali pv. ulmi strain ICMP 5931 suggests that it may have a competitive advantage in colonizing plant surfaces or entering plant tissues. Its ability to move can facilitate the spread of disease within plant populations, impacting agricultural practices and crop yields. Understanding the traits of this strain can provide insights into its role in plant-pathogen interactions and its potential implications for managing plant health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas amygdali
Strainpv. ulmi strain ICMP 5931

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas amygdali pv. ulmi strain ICMP 5931
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas amygdali pv. ulmi strain ICMP 5931

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5621 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
branched-chain amino acid abc transporter periplasmic amino acid-binding proteinALP90_02378Not AvailablePositive3270420 - 327168546201.2
branched-chain amino acid abc transporter permeaseALP90_02379Not AvailablePositive3271929 - 327351856227.7
branched-chain amino acid abc transporter, permease proteinALP90_02380Not AvailablePositive3273518 - 327459738849.6
branched-chain amino acid abc transporter, atp-binding proteinALP90_02381Not AvailablePositive3274594 - 327545430924.3
branched-chain amino acid abc transporter, atp-binding proteinALP90_02382Not AvailablePositive3275551 - 327624925656.5
urease accessory protein uredALP90_02383Not AvailablePositive3276302 - 327714731098.2
urease subunit gammaALP90_02384Not AvailablePositive3277450 - 327775210998.4
phosphinothricin n-acetyltransferaseALP90_02385Not AvailablePositive3277757 - 327830520120.2
tabtoxin resistance proteinALP90_02386Not AvailablePositive3278316 - 327884919214.1
urease subunit alphaALP90_02387Not AvailablePositive3279486 - 328118660700.7

Displaying genes 3061 – 3070 of 5702 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.