Pseudomonas amygdali pv. ulmi strain ICMP 5931

RodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas amygdali pv. ulmi strain ICMP 5931 is a Gram-negative bacterium characterized by its rod-shaped morphology and mobility, which is indicative of its ability to move in various environments. This strain possesses a single replicon, allowing for efficient genetic regulation and replication. The strain is cataloged under the accession RBRS00000000.1, which serves as a reference for genetic and genomic studies. Pseudomonas amygdali pv. ulmi is known to be a pathogen affecting plants, specifically associated with diseases in various species. From an ecological perspective, the mobility of Pseudomonas amygdali pv. ulmi strain ICMP 5931 suggests that it may have a competitive advantage in colonizing plant surfaces or entering plant tissues. Its ability to move can facilitate the spread of disease within plant populations, impacting agricultural practices and crop yields. Understanding the traits of this strain can provide insights into its role in plant-pathogen interactions and its potential implications for managing plant health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas amygdali
Strainpv. ulmi strain ICMP 5931

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas amygdali pv. ulmi strain ICMP 5931
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas amygdali pv. ulmi strain ICMP 5931

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5621 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
marr family transcriptional regulatorALP90_01557Not AvailablePositive2073361 - 207381316068.4
hypothetical proteinALP90_01558Not AvailablePositive2073810 - 207589777672.1
hypothetical proteinALP90_01559Not AvailablePositive2075894 - 20761037816.95
hlyd family secretion proteinALP90_01560Not AvailablePositive2076100 - 207698432725.1
nodt family outer membrane efflux lipoproteinALP90_01561Not AvailablePositive2076981 - 207841451586.1
ribosomal protein alanine acetyltransferaseALP90_01562Not AvailableNegative2078435 - 207900121375.4
catechol 1,2-dioxygenaseALP90_01563Not AvailableNegative2079282 - 208021134482.3
muconolactone delta-isomeraseALP90_01564Not AvailableNegative2080249 - 208061413922.8
muconate cycloisomeraseALP90_01565Not AvailableNegative2080580 - 208169539962.4
benzoate dioxygenase, ferredoxin reductase componentALP90_01566Not AvailableNegative2081753 - 208277537124.9

Displaying genes 1991 – 2000 of 5702 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.