Pseudomonas syringae pv. primulae strain ICMP 8670

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae pv. primulae strain ICMP 8670 is characterized by having a single replicon, which indicates a streamlined genomic organization. The strain is cataloged under the accession number RBRQ00000000.1, which is essential for its identification and classification in microbial databases. Pseudomonas syringae is known for its role as a plant pathogen, capable of infecting a wide range of plant species. The specific pathovar, primulae, suggests a specialized interaction with primrose plants. This specialization may offer insights into the ecological dynamics between the pathogen and its host, particularly in how the bacterium adapts to and exploits specific plant environments. The presence of a single replicon in Pseudomonas syringae pv. primulae strain ICMP 8670 may reflect adaptation strategies that promote efficient replication and resource utilization within its ecological niche. This trait could contribute to the pathogen's ability to effectively colonize host plants and potentially impact agricultural practices. In summary, Pseudomonas syringae pv. primulae strain ICMP 8670, with its single replicon and specific pathovar designation, exemplifies the intricate relationships between microbial pathogens and their plant hosts. Understanding these traits can provide valuable insights into managing plant diseases and improving crop resilience.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae group genomosp. 3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas syringae pv. primulae strain ICMP 8670
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas syringae pv. primulae strain ICMP 8670

Gene Summary

Adenine Count

1293567 bp

Thymine Count

1302667 bp

Guanine Count

1843912 bp

Cytosine Count

1836969 bp

Genome Length

6298286 bp

Protein-coding Genes

5223 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
xanthine/uracil permease proteinALP92_04148Not AvailableNegative6080644 - 608209551009.5
lysr family transcriptional regulatorALP92_00424Not AvailableNegative6082200 - 608255913460.1
hypothetical proteinALP92_03722Not AvailableNegative6083901 - 608528650998.4
4-aminobutyrate aminotransferaseALP92_05024Not AvailableNegative6085310 - 608655744360.7
piperideine-6-carboxylate dehydrogenaseALP92_03724Not AvailablePositive6086822 - 608831253324.6
hypothetical proteinALP92_03725Not AvailablePositive6088355 - 608964445808.3
sensor histidine kinaseALP92_03726Not AvailableNegative6089657 - 609103050787.3
dna-binding response regulatorALP92_03727Not AvailableNegative6091027 - 609168924719.1
hypothetical proteinALP92_03728Not AvailablePositive6091857 - 60921209879.94
cytochrome proteinALP92_03729Not AvailablePositive6092120 - 609266520617.3

Displaying genes 5131 – 5140 of 5305 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.