Pseudomonas syringae pv. primulae strain ICMP 8670

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae pv. primulae strain ICMP 8670 is characterized by having a single replicon, which indicates a streamlined genomic organization. The strain is cataloged under the accession number RBRQ00000000.1, which is essential for its identification and classification in microbial databases. Pseudomonas syringae is known for its role as a plant pathogen, capable of infecting a wide range of plant species. The specific pathovar, primulae, suggests a specialized interaction with primrose plants. This specialization may offer insights into the ecological dynamics between the pathogen and its host, particularly in how the bacterium adapts to and exploits specific plant environments. The presence of a single replicon in Pseudomonas syringae pv. primulae strain ICMP 8670 may reflect adaptation strategies that promote efficient replication and resource utilization within its ecological niche. This trait could contribute to the pathogen's ability to effectively colonize host plants and potentially impact agricultural practices. In summary, Pseudomonas syringae pv. primulae strain ICMP 8670, with its single replicon and specific pathovar designation, exemplifies the intricate relationships between microbial pathogens and their plant hosts. Understanding these traits can provide valuable insights into managing plant diseases and improving crop resilience.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae group genomosp. 3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas syringae pv. primulae strain ICMP 8670
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas syringae pv. primulae strain ICMP 8670

Gene Summary

Adenine Count

1293567 bp

Thymine Count

1302667 bp

Guanine Count

1843912 bp

Cytosine Count

1836969 bp

Genome Length

6298286 bp

Protein-coding Genes

5223 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinALP92_04196Not AvailableNegative4678469 - 467991754295.5
putative lipopolysaccharide biosynthesis proteinALP92_00611Not AvailableNegative4679945 - 468070628821.4
lipopolysaccharide core biosynthesis proteinALP92_00612Not AvailableNegative4680703 - 468143728526.2
lipopolysaccharide core heptose kinase rfapALP92_00613Not AvailableNegative4681437 - 468224330670.1
lipopolysaccharide core biosynthesis protein waagALP92_00614Not AvailableNegative4682243 - 468336442089.6
lipopolysaccharide heptosyltransferase iALP92_00615Not AvailableNegative4683364 - 468442839293.3
adp-heptose:lps heptosyltransferase iiALP92_102987Not AvailableNegative4684431 - 468546538065.1
hypothetical proteinALP92_101743Not AvailablePositive4685382 - 46855526414.51
glutamate-ammonia-ligase adenylyltransferaseALP92_00616Not AvailableNegative4685595 - 4688552110695.0
pyruvate dehydrogenase subunit e1ALP92_04197Not AvailablePositive4688745 - 4691582105999.0

Displaying genes 3941 – 3950 of 5305 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.