Pseudomonas syringae pv. tomato strain ICMP 7230

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae pv. tomato strain ICMP 7230 is a bacterial pathogen characterized by a single replicon. This strain primarily infects a range of host plants, including Solanum tuberosum (potato), Solanum lycopersicum (tomato), Arabidopsis, Nicotiana tabacum (tobacco), and Capsicum annuum (pepper). It is known to cause bacterial speck, a disease that manifests as dark, water-soaked lesions on the leaves and fruits of infected plants, potentially leading to significant agricultural losses. The strain is cataloged under the accession number RBRI00000000.1, which allows for its identification and study within microbial databases. The ability of Pseudomonas syringae pv. tomato strain ICMP 7230 to infect multiple economically important crops highlights its relevance in agricultural microbiology and plant pathology. In terms of ecological implications, the presence of this pathogen in diverse plant species suggests a complex interaction within agroecosystems. The potential for cross-infection among different crops may complicate management strategies for bacterial speck and underscores the importance of monitoring practices in susceptible plants to mitigate outbreaks. Understanding the epidemiology and host range of Pseudomonas syringae pv. tomato strain ICMP 7230 is crucial for developing effective disease management approaches in affected agricultural systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae group genomosp. 3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas syringae pv. tomato strain ICMP 7230
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Solanum tuberosum, Solanum lycopersicum, Arabidopsis
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityPlant

Genome Summary

Pseudomonas syringae pv. tomato strain ICMP 7230

Gene Summary

Adenine Count

1298381 bp

Thymine Count

1298555 bp

Guanine Count

1839662 bp

Cytosine Count

1837282 bp

Genome Length

6287612 bp

Protein-coding Genes

5686 genes

Non-Coding Genes

236 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphatidylcholine synthaseALQ00_04759Not AvailableNegative3546181 - 354697529302.5
hypothetical proteinALQ00_04761Not AvailableNegative3546987 - 354900875961.1
methyl-accepting chemotaxis proteinALQ00_00557Not AvailablePositive3549281 - 355092157821.2
acetyltransferase, gnat familyALQ00_00558Not AvailableNegative3550930 - 355136716747.9
ggdef domain proteinALQ00_00559Not AvailableNegative3551443 - 355263944325.7
gdp-mannose 4,6-dehydrataseALQ00_04762Not AvailablePositive3552830 - 355402944986.1
gdp-6-deoxy-d-lyxo-4-hexulose reductaseALQ00_04763Not AvailableNegative3554107 - 355509335627.7
methyl-accepting chemotaxis proteinALQ00_04764Not AvailablePositive3555139 - 355661153959.4
isochorismatase proteinALQ00_04765Not AvailableNegative3557195 - 355786624701.6
alkaline phosphataseALQ00_100348Not AvailableNegative3557976 - 355954757803.7

Displaying genes 3481 – 3490 of 5922 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Bacterial speckCausesPMC7586749
Bacterial speckCausesPMC12211302

Displaying health effects 1 – 2 of 2 in total