Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas cichorii |
| Strain | strain ICMP 3353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Solanum lycopersicum, Geranium |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1244678 bp
Thymine Count
1244772 bp
Guanine Count
1768612 bp
Cytosine Count
1762269 bp
Genome Length
6028563 bp
Protein-coding Genes
4796 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii and iii secretion system protein | ALQ04_01870 | Not Available | Negative | 307641 - 309161 | 51945.3 |
| hypothetical protein | ALQ04_01871 | Not Available | Negative | 309219 - 310145 | 32447.7 |
| hypothetical protein | ALQ04_01872 | Not Available | Negative | 310166 - 310723 | 19841.5 |
| flp/fap pilin component | ALQ04_01873 | Not Available | Negative | 310747 - 310947 | 6918.19 |
| histidine kinase | ALQ04_01874 | Not Available | Negative | 311081 - 312472 | 52018.0 |
| winged helix family two component transcriptional regulator | ALQ04_01875 | Not Available | Negative | 312447 - 313112 | 25162.5 |
| dna topoisomerase | ALQ04_04874 | Not Available | Negative | 313399 - 315555 | 78744.5 |
| nitrite reductase, small subunit | ALQ04_01877 | Not Available | Negative | 315477 - 315863 | 14079.8 |
| fad-dependent pyridine nucleotide-disulfide oxidoreductase:nitrite/sulfite reductase | ALQ04_04876 | Not Available | Negative | 315863 - 318520 | 96791.5 |
| acetyltransferase | ALQ04_01879 | Not Available | Positive | 318802 - 319296 | 18356.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.






