Pseudomonas amygdali pv. mori strain ICMP 535

RodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas amygdali pv. mori strain ICMP 535 is a Gram-negative, rod-shaped bacterium known for its mobility. This strain possesses a single replicon, which is indicative of its genomic structure. The accession number for this strain is RBRD00000000.1, which serves as a unique identifier in genomic databases. In terms of ecological and biological implications, the mobility of Pseudomonas amygdali pv. mori strain ICMP 535 may contribute to its adaptability in various environments. This characteristic allows the bacterium to colonize different niches and interact with various hosts, potentially influencing plant health and disease dynamics. The single replicon suggests a streamlined genetic organization, which could be a factor in its efficiency in resource utilization and adaptability to changing conditions. Overall, the traits of Pseudomonas amygdali pv. mori strain ICMP 535 highlight its potential role in ecological interactions, particularly in the context of plant-microbe relationships.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas amygdali
Strainpv. mori strain ICMP 535

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas amygdali pv. mori strain ICMP 535
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas amygdali pv. mori strain ICMP 535

Gene Summary

Adenine Count

1264560 bp

Thymine Count

1265278 bp

Guanine Count

1744893 bp

Cytosine Count

1745691 bp

Genome Length

6041451 bp

Protein-coding Genes

5464 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
integraseALQ05_01238Not AvailableNegative5929249 - 593053848346.1
nh synthetaseALQ05_04722Not AvailableNegative5930621 - 593116619513.4
nicotinate phosphoribosyltransferaseALQ05_01240Not AvailableNegative5931190 - 593241346708.4
lysr family transcriptional regulatorALQ05_01241Not AvailableNegative5932513 - 593341834456.3
high affinity branched-chain amino acid abc transporter periplasmic amino acid-binding proteinALQ05_01242Not AvailablePositive5933924 - 593506039958.6
hypothetical proteinALQ05_100758Not AvailablePositive5935102 - 59352123632.51
high-affinity branched-chain amino acid abc transporterALQ05_01243Not AvailablePositive5935219 - 593613632749.2
high-affinity branched-chain amino acid abc transporterALQ05_01244Not AvailablePositive5936139 - 593745247270.5
high affinity branched-chain amino acid abc transporter atp-binding proteinALQ05_01245Not AvailablePositive5937449 - 593832432389.4
high affinity branched-chain amino acid abc transporterALQ05_100021Not AvailablePositive5938321 - 593903726228.1

Displaying genes 5481 – 5490 of 5575 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.