Pseudomonas amygdali pv. mori strain ICMP 535

RodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas amygdali pv. mori strain ICMP 535 is a Gram-negative, rod-shaped bacterium known for its mobility. This strain possesses a single replicon, which is indicative of its genomic structure. The accession number for this strain is RBRD00000000.1, which serves as a unique identifier in genomic databases. In terms of ecological and biological implications, the mobility of Pseudomonas amygdali pv. mori strain ICMP 535 may contribute to its adaptability in various environments. This characteristic allows the bacterium to colonize different niches and interact with various hosts, potentially influencing plant health and disease dynamics. The single replicon suggests a streamlined genetic organization, which could be a factor in its efficiency in resource utilization and adaptability to changing conditions. Overall, the traits of Pseudomonas amygdali pv. mori strain ICMP 535 highlight its potential role in ecological interactions, particularly in the context of plant-microbe relationships.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas amygdali
Strainpv. mori strain ICMP 535

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas amygdali pv. mori strain ICMP 535
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas amygdali pv. mori strain ICMP 535

Gene Summary

Adenine Count

1264560 bp

Thymine Count

1265278 bp

Guanine Count

1744893 bp

Cytosine Count

1745691 bp

Genome Length

6041451 bp

Protein-coding Genes

5464 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hrpaALQ05_03570Not AvailableNegative3324682 - 332499611269.1
type iii transcriptional regulator hrpsALQ05_03571Not AvailableNegative3325090 - 332599833256.3
hrprALQ05_03572Not AvailableNegative3326049 - 332696934199.6
lytic murein transglycosylaseALQ05_05276Not AvailableNegative3328052 - 332953053989.6
type iii effector avre1ALQ05_03574Not AvailablePositive3329696 - 3334885188025.0
type iii chaperone protein avrfALQ05_03575Not AvailableNegative3334934 - 333532314369.1
effector protein hopm1ALQ05_03576Not AvailableNegative3335401 - 333763578147.1
type iii chaperone protein shcmALQ05_03577Not AvailableNegative3337632 - 333817420414.0
type iii helper protein hrpw1ALQ05_03578Not AvailablePositive3338478 - 333975844119.0
type iii effector hopaa1-1ALQ05_05277Not AvailableNegative3339845 - 334074430655.3

Displaying genes 3131 – 3140 of 5575 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.