Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. mori strain ICMP 535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1264560 bp
Thymine Count
1265278 bp
Guanine Count
1744893 bp
Cytosine Count
1745691 bp
Genome Length
6041451 bp
Protein-coding Genes
5464 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hrpa | ALQ05_03570 | Not Available | Negative | 3324682 - 3324996 | 11269.1 |
| type iii transcriptional regulator hrps | ALQ05_03571 | Not Available | Negative | 3325090 - 3325998 | 33256.3 |
| hrpr | ALQ05_03572 | Not Available | Negative | 3326049 - 3326969 | 34199.6 |
| lytic murein transglycosylase | ALQ05_05276 | Not Available | Negative | 3328052 - 3329530 | 53989.6 |
| type iii effector avre1 | ALQ05_03574 | Not Available | Positive | 3329696 - 3334885 | 188025.0 |
| type iii chaperone protein avrf | ALQ05_03575 | Not Available | Negative | 3334934 - 3335323 | 14369.1 |
| effector protein hopm1 | ALQ05_03576 | Not Available | Negative | 3335401 - 3337635 | 78147.1 |
| type iii chaperone protein shcm | ALQ05_03577 | Not Available | Negative | 3337632 - 3338174 | 20414.0 |
| type iii helper protein hrpw1 | ALQ05_03578 | Not Available | Positive | 3338478 - 3339758 | 44119.0 |
| type iii effector hopaa1-1 | ALQ05_05277 | Not Available | Negative | 3339845 - 3340744 | 30655.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.








