Pseudomonas amygdali pv. mori strain ICMP 535

RodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas amygdali pv. mori strain ICMP 535 is a Gram-negative, rod-shaped bacterium known for its mobility. This strain possesses a single replicon, which is indicative of its genomic structure. The accession number for this strain is RBRD00000000.1, which serves as a unique identifier in genomic databases. In terms of ecological and biological implications, the mobility of Pseudomonas amygdali pv. mori strain ICMP 535 may contribute to its adaptability in various environments. This characteristic allows the bacterium to colonize different niches and interact with various hosts, potentially influencing plant health and disease dynamics. The single replicon suggests a streamlined genetic organization, which could be a factor in its efficiency in resource utilization and adaptability to changing conditions. Overall, the traits of Pseudomonas amygdali pv. mori strain ICMP 535 highlight its potential role in ecological interactions, particularly in the context of plant-microbe relationships.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas amygdali
Strainpv. mori strain ICMP 535

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas amygdali pv. mori strain ICMP 535
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas amygdali pv. mori strain ICMP 535

Gene Summary

Adenine Count

1264560 bp

Thymine Count

1265278 bp

Guanine Count

1744893 bp

Cytosine Count

1745691 bp

Genome Length

6041451 bp

Protein-coding Genes

5464 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aspartate/glutamate abc-type transport systemALQ05_00701Not AvailablePositive2932515 - 293318024200.6
amino acid abc transporter atp-binding proteinALQ05_00702Not AvailablePositive2933177 - 293391126922.8
sensor histidine kinaseALQ05_00703Not AvailablePositive2933967 - 293589871354.4
sigma-54 dependent dna-binding response regulatorALQ05_00704Not AvailablePositive2935909 - 293723748858.4
2-hydroxychromene-2-carboxylate isomerase proteinALQ05_00705Not AvailableNegative2937369 - 293801624156.5
alpha/beta hydrolase fold proteinALQ05_00706Not AvailableNegative2938098 - 293911736950.4
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferaseALQ05_00707Not AvailableNegative2939214 - 293994827507.0
transcriptional activator metrALQ05_00708Not AvailablePositive2940019 - 294097235370.0
mutt/nudix proteinALQ05_00709Not AvailableNegative2941011 - 294142114913.2
d-alanine--d-alanine ligaseALQ05_00710Not AvailableNegative2941418 - 294250939121.1

Displaying genes 2771 – 2780 of 5575 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.