Pseudomonas syringae pv. atrofaciens strain ICMP 1852

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae pv. atrofaciens strain ICMP 1852 is a Gram-negative, rod-shaped bacterium that typically exists as single cells and functions as a heterotroph. This strain is classified as an aerobic organism, requiring oxygen for its metabolic processes. Pseudomonas syringae pv. atrofaciens, as a member of the Pseudomonas genus, is known to inhabit diverse environments, suggesting a broad ecological versatility. The ability of this bacterium to thrive in multiple habitats may be attributed to its metabolic flexibility, allowing it to utilize a variety of organic compounds for energy. This trait is particularly advantageous in fluctuating environmental conditions, where nutrient availability can vary significantly. Moreover, the aerobic nature of Pseudomonas syringae pv. atrofaciens indicates that it might play a role in the cycling of carbon and other nutrients in its ecosystems, especially in oxygen-rich environments. Overall, the ecological implications of strain ICMP 1852 extend to its potential involvement in biogeochemical processes and its adaptability to various ecological niches, reinforcing the significance of Pseudomonas species in microbial ecology and their interactions within diverse ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas syringae pv. atrofaciens strain ICMP 1852
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas syringae pv. atrofaciens strain ICMP 1852

Accession NumberRBQO00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5336 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Portal proteinALQ20_02119Not Available-3237475 - 323824828795.1
Putative terminase atpase subunitALQ20_02120Not Available-3238211 - 324030779347.8
Gpo family capsid scaffolding proteinALQ20_02121Not Available+3240469 - 324140133491.6
Major capsid proteinALQ20_02122Not Available+3241403 - 324242537514.3
Putative terminase endonuclease subunitALQ20_02123Not Available+3242422 - 324314427251.4
Putative head completion/stabilization proteinALQ20_02124Not Available+3243615 - 324407616878.1
Virion morphogenesis family proteinALQ20_02125Not Available+3244506 - 324517425157.3
Putative tail sheath proteinALQ20_02126Not Available+3245189 - 324630139233.1
Putative tail tube proteinALQ20_02127Not Available+3246305 - 324675715887.8
Dksa/trar family c4-type zinc finger proteinALQ20_100494Not Available+3246757 - 32469667536.1

Displaying genes 71 – 80 of 5479 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites