Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP 1852 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1206902 bp
Thymine Count
1195914 bp
Guanine Count
1727068 bp
Cytosine Count
1734779 bp
Genome Length
5948024 bp
Protein-coding Genes
5336 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ20_05460 | Not Available | Positive | 4773019 - 4774110 | 38657.9 |
| sarcosine oxidase, delta subunit | ALQ20_03850 | Not Available | Negative | 4774092 - 4774388 | 11463.4 |
| sarcosine oxidase, beta subunit | ALQ20_03851 | Not Available | Negative | 4774404 - 4775654 | 45298.1 |
| serine hydroxymethyltransferase | ALQ20_05377 | Not Available | Negative | 4775672 - 4776925 | 44948.4 |
| choline abc-type transport system, atp-binding protein | ALQ20_05378 | Not Available | Negative | 4777187 - 4778560 | 50637.4 |
| choline abc-type transport system, permease protein | ALQ20_03854 | Not Available | Negative | 4778362 - 4779207 | 30457.3 |
| choline abc-type transport system, periplasmic substrate-binding protein | ALQ20_03855 | Not Available | Negative | 4779275 - 4780222 | 34462.4 |
| transcriptional regulator gbdr | ALQ20_03856 | Not Available | Positive | 4781002 - 4782108 | 41127.8 |
| transposase | ALQ20_102820 | Not Available | Positive | 4782233 - 4782691 | 17383.6 |
| tetr family transcriptional regulator | ALQ20_03963 | Not Available | Negative | 4782773 - 4783177 | 15063.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









