Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP 1852 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1206902 bp
Thymine Count
1195914 bp
Guanine Count
1727068 bp
Cytosine Count
1734779 bp
Genome Length
5948024 bp
Protein-coding Genes
5336 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system protein icmf | ALQ20_03784 | Not Available | Positive | 4397109 - 4399601 | 94255.9 |
| putative type vi secretion system effector, hcp1 family | ALQ20_03785 | Not Available | Positive | 4399736 - 4400275 | 19146.4 |
| impa, n-terminal | ALQ20_03786 | Not Available | Positive | 4400368 - 4401462 | 39936.1 |
| topoisomerase domain-containing protein | ALQ20_03553 | Not Available | Positive | 4402008 - 4402436 | 15473.0 |
| lysm domain-containing protein | ALQ20_05240 | Not Available | Negative | 4402469 - 4404226 | 61524.9 |
| gntr family transcriptional regulator | ALQ20_03013 | Not Available | Negative | 4404331 - 4405377 | 37558.9 |
| tonb-dependent outer membrane receptor | ALQ20_05018 | Not Available | Positive | 4405549 - 4407864 | 84062.3 |
| xenobiotic compound monooxygenase a subunit | ALQ20_100707 | Not Available | Positive | 4407899 - 4409224 | 48125.9 |
| rhs protein | ALQ20_00200 | Not Available | Negative | 4409405 - 4409871 | 18089.9 |
| hsr1-like gtp-binding protein | ALQ20_04185 | Not Available | Negative | 4409872 - 4410711 | 31350.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









