Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP 1852 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1206902 bp
Thymine Count
1195914 bp
Guanine Count
1727068 bp
Cytosine Count
1734779 bp
Genome Length
5948024 bp
Protein-coding Genes
5336 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative proteinh:ubiquinone oxidoreductase, subunit e | ALQ20_03452 | Not Available | Positive | 4027151 - 4027648 | 17908.4 |
| pectate lyase l | ALQ20_05013 | Not Available | Positive | 4029021 - 4029324 | 11100.1 |
| hypothetical protein | ALQ20_03435 | Not Available | Positive | 4029472 - 4031019 | 57650.4 |
| putative lipoprotein | ALQ20_05174 | Not Available | Positive | 4031049 - 4031789 | 26104.2 |
| putative lipoprotein | ALQ20_03437 | Not Available | Positive | 4031797 - 4032297 | 18196.5 |
| von willebrand factor type a domain protein | ALQ20_03438 | Not Available | Positive | 4032353 - 4033612 | 45403.6 |
| rnd-type efflux system, inner membrane pump protein psec | ALQ20_03439 | Not Available | Negative | 4033692 - 4036736 | 109398.0 |
| rnd-type efflux system, membrane fusion protein pseb | ALQ20_03440 | Not Available | Negative | 4036733 - 4037890 | 40844.1 |
| regulatory protein, arsr | ALQ20_05108 | Not Available | Positive | 4038033 - 4038479 | 16297.6 |
| rhs family yd-repeats/paar motif protein | ALQ20_04621 | Not Available | Negative | 4038480 - 4040822 | 89924.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









