Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP 1852 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1206902 bp
Thymine Count
1195914 bp
Guanine Count
1727068 bp
Cytosine Count
1734779 bp
Genome Length
5948024 bp
Protein-coding Genes
5336 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxygen-dependent coproporphyrinogen-iii oxidase | ALQ20_03207 | Not Available | Positive | 3383621 - 3384535 | 34581.4 |
| trehalose synthase/ maltokinase | ALQ20_04215 | Not Available | Negative | 3385076 - 3385510 | 16831.2 |
| hypothetical protein | ALQ20_03046 | Not Available | Negative | 3385719 - 3386501 | 28825.5 |
| hypothetical protein | ALQ20_05026 | Not Available | Positive | 3387694 - 3388197 | 17855.4 |
| type iii secretion system effector protein avre1 | ALQ20_04382 | Not Available | Negative | 3388198 - 3392599 | 159629.0 |
| slt protein | ALQ20_01316 | Not Available | Positive | 3392818 - 3394341 | 55964.7 |
| type iii secretion system transcriptional regulator hrps | ALQ20_01317 | Not Available | Positive | 3396406 - 3397314 | 33460.6 |
| type iii secretion system helper protein hrpa2 | ALQ20_01318 | Not Available | Positive | 3397407 - 3397733 | 11006.8 |
| type iii secretion system helper protein hrpz1 | ALQ20_01319 | Not Available | Positive | 3397783 - 3398814 | 34721.6 |
| type iii secretion system protein hrpb | ALQ20_01320 | Not Available | Positive | 3398842 - 3399216 | 12742.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









