Pseudomonas syringae pv. atrofaciens strain ICMP 1852

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae pv. atrofaciens strain ICMP 1852 is a Gram-negative, rod-shaped bacterium characterized as a heterotrophic aerobe. This strain exhibits mobility, facilitated by the presence of flagella, and typically exists as single cells rather than in clusters. It is classified as mesophilic, indicating that it thrives within moderate temperature ranges. The organism has a complex cellular structure, with two membranes surrounding its cytoplasm and a single replicon in its genetic makeup. Its free-living nature suggests that it can survive independently in various habitats, contributing to its ecological versatility. Pseudomonas syringae species, including strain ICMP 1852, are known for their role in plant pathology and are often involved in interactions with plant hosts. Understanding the ecological roles and environmental adaptability of this strain can inform its potential applications in agriculture and biotechnology, particularly in developing strategies for disease management. The diverse habitats in which it can be found underscore its ecological significance and potential impact on plant health and agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae
Strainpv. atrofaciens strain ICMP 1852

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas syringae pv. atrofaciens strain ICMP 1852
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas syringae pv. atrofaciens strain ICMP 1852

Gene Summary

Adenine Count

1206902 bp

Thymine Count

1195914 bp

Guanine Count

1727068 bp

Cytosine Count

1734779 bp

Genome Length

5948024 bp

Protein-coding Genes

5336 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
isps1a-2ALQ20_04917Not AvailablePositive1998650 - 199891310743.4
small multidrug resistance proteinALQ20_02699Not AvailablePositive1999623 - 199996111848.9
catalase-related peroxidaseALQ20_02700Not AvailablePositive2000113 - 200118639009.1
cytochromeALQ20_02701Not AvailablePositive2001183 - 200179122737.5
putative tyrosine recombinase xercALQ20_04918Not AvailablePositive2001924 - 200285735315.6
hypothetical proteinALQ20_05450Not AvailablePositive2002907 - 200395938703.2
hypothetical proteinALQ20_03503Not AvailableNegative2003986 - 200557560299.5
integral membrane proteinALQ20_100512Not AvailableNegative2005562 - 200654235946.0
hypothetical proteinALQ20_03504Not AvailableNegative2006539 - 200726426267.5
exodeoxyribonuclease iALQ20_03505Not AvailablePositive2007445 - 200887554449.4

Displaying genes 1951 – 1960 of 5479 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.