Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP 1852 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1206902 bp
Thymine Count
1195914 bp
Guanine Count
1727068 bp
Cytosine Count
1734779 bp
Genome Length
5948024 bp
Protein-coding Genes
5336 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system effector hopai1 | ALQ20_00742 | Not Available | Negative | 1933346 - 1934149 | 29439.3 |
| endoglucanase | ALQ20_100799 | Not Available | Negative | 1934316 - 1935599 | 43693.0 |
| type iii secretion system effector hopag1 | ALQ20_04222 | Not Available | Negative | 1935705 - 1937855 | 79092.5 |
| laci transcriptional regulator | ALQ20_00744 | Not Available | Positive | 1938518 - 1939531 | 36684.9 |
| periplasmic binding protein/laci transcriptional regulator | ALQ20_00745 | Not Available | Positive | 1939783 - 1940733 | 32772.2 |
| abc transporter | ALQ20_00746 | Not Available | Positive | 1940744 - 1941520 | 27757.8 |
| inner-membrane translocator | ALQ20_04223 | Not Available | Positive | 1941517 - 1942461 | 33008.6 |
| hypothetical protein | ALQ20_01968 | Not Available | Positive | 1942885 - 1943166 | 10808.2 |
| autotransporter barrel protein with pertacin-like passenger domain | ALQ20_01969 | Not Available | Positive | 1943768 - 1946062 | 80102.9 |
| hypothetical protein | ALQ20_01970 | Not Available | Negative | 1946127 - 1946651 | 19851.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









