Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP 1852 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1206902 bp
Thymine Count
1195914 bp
Guanine Count
1727068 bp
Cytosine Count
1734779 bp
Genome Length
5948024 bp
Protein-coding Genes
5336 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative thiol peroxidase | ALQ20_03345 | Not Available | Negative | 1499087 - 1499587 | 17295.5 |
| lysr family transcriptional regulator | ALQ20_03346 | Not Available | Negative | 1499678 - 1500607 | 34241.7 |
| hypothetical protein | ALQ20_03347 | Not Available | Negative | 1500715 - 1502292 | 55772.8 |
| type iii secretion system effector protein avre1 | ALQ20_01546 | Not Available | Positive | 1502381 - 1503041 | 24186.5 |
| hypothetical protein | ALQ20_01547 | Not Available | Negative | 1503103 - 1503498 | 14652.4 |
| type iii secretino system effector protein hopm1 | ALQ20_04469 | Not Available | Negative | 1503603 - 1505762 | 75511.7 |
| type iii chaperone protein shcm | ALQ20_01548 | Not Available | Negative | 1505759 - 1506253 | 18157.6 |
| type iii secretion system helper protein hrpw1 | ALQ20_01549 | Not Available | Positive | 1506558 - 1507880 | 44540.1 |
| type iii secretion system effector hopaa1 | ALQ20_01550 | Not Available | Negative | 1507964 - 1509031 | 36246.2 |
| potassium-transporting atpase b chain | ALQ20_02438 | Not Available | Positive | 1509054 - 1509896 | 29598.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









