Pseudomonas syringae pv. atrofaciens strain ICMP 1852

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae pv. atrofaciens strain ICMP 1852 is a Gram-negative, rod-shaped bacterium that typically exists as single cells and functions as a heterotroph. This strain is classified as an aerobic organism, requiring oxygen for its metabolic processes. Pseudomonas syringae pv. atrofaciens, as a member of the Pseudomonas genus, is known to inhabit diverse environments, suggesting a broad ecological versatility. The ability of this bacterium to thrive in multiple habitats may be attributed to its metabolic flexibility, allowing it to utilize a variety of organic compounds for energy. This trait is particularly advantageous in fluctuating environmental conditions, where nutrient availability can vary significantly. Moreover, the aerobic nature of Pseudomonas syringae pv. atrofaciens indicates that it might play a role in the cycling of carbon and other nutrients in its ecosystems, especially in oxygen-rich environments. Overall, the ecological implications of strain ICMP 1852 extend to its potential involvement in biogeochemical processes and its adaptability to various ecological niches, reinforcing the significance of Pseudomonas species in microbial ecology and their interactions within diverse ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas syringae pv. atrofaciens strain ICMP 1852
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas syringae pv. atrofaciens strain ICMP 1852

Accession NumberRBQO00000000.1

Gene Summary

Adenine Count

1206902 bp

Thymine Count

1195914 bp

Guanine Count

1727068 bp

Cytosine Count

1734779 bp

Genome Length

5948024 bp

Protein-coding Genes

5336 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
putative prophage pssb64-02, orf16ALQ20_103392Not Available+5593135 - 559349712593.7
Tail tape measure proteinALQ20_00704Not Available+5593554 - 5597249127448.0
Hypothetical proteinALQ20_00705Not Available+5597267 - 559785121205.2
hypothetical proteinALQ20_200038Not Available+108 - 2033209.27
pepsy-associated tm helixALQ20_01998Not Available+262 - 119133213.7
hypothetical proteinALQ20_01999Not Available+1188 - 13706474.16
glutathione s-transferase proteinALQ20_02000Not Available+1440 - 206923638.1
putative atp-dependent zinc proteaseALQ20_02001Not Available-2174 - 267718563.2
putative acyltransferaseALQ20_02002Not Available+2871 - 376433770.5
yd repeat proteinALQ20_100993Not Available+3815 - 488238489.6

Displaying genes 121 – 130 of 5479 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites