Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas savastanoi |
| Strain | pv. retacarpa strain ICMP 16946 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 28 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Retama sphaerocarpa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1199582 bp
Thymine Count
1199844 bp
Guanine Count
1660800 bp
Cytosine Count
1655145 bp
Genome Length
5771807 bp
Protein-coding Genes
5335 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrodipicolinate synthase/n-acetylneuraminate lyase | ALQ22_01889 | Not Available | Negative | 449096 - 449590 | 18162.5 |
| pectate-binding harpin | ALQ22_04563 | Not Available | Positive | 449891 - 451141 | 43234.2 |
| type iii effector hopaa1-1 | ALQ22_01891 | Not Available | Negative | 451228 - 452103 | 29740.2 |
| hypothetical protein | ALQ22_102047 | Not Available | Positive | 452688 - 452993 | 10998.1 |
| conserved effector locus protein | ALQ22_01892 | Not Available | Positive | 453015 - 454004 | 36926.8 |
| hypothetical protein | ALQ22_101506 | Not Available | Negative | 454044 - 454172 | 4188.27 |
| sensory box histidine kinase/response regulator | ALQ22_101147 | Not Available | Negative | 454191 - 455414 | 43040.3 |
| hypothetical protein | ALQ22_101996 | Not Available | Positive | 456573 - 456887 | 11842.0 |
| oxidoreductase, short chain dehydrogenase/reductase family | ALQ22_04564 | Not Available | Negative | 457133 - 457312 | 6051.19 |
| hypothetical protein | ALQ22_102643 | Not Available | Positive | 457379 - 457543 | 5846.96 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.







