Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas savastanoi |
| Strain | pv. retacarpa strain ICMP 16946 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 28 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Retama sphaerocarpa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1199582 bp
Thymine Count
1199844 bp
Guanine Count
1660800 bp
Cytosine Count
1655145 bp
Genome Length
5771807 bp
Protein-coding Genes
5335 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii chaperone protein scha | ALQ22_01861 | Not Available | Negative | 414048 - 414428 | 13999.2 |
| type iii helper protein hrpk | ALQ22_04559 | Not Available | Negative | 414575 - 416971 | 83521.5 |
| rna polymerase sigma factor | ALQ22_01863 | Not Available | Negative | 416955 - 417509 | 21100.2 |
| type iii secretion component protein hrcj | ALQ22_01864 | Not Available | Positive | 417753 - 418859 | 40576.3 |
| type iii secretion system inner membrane protein | ALQ22_01865 | Not Available | Positive | 418856 - 420943 | 76577.0 |
| putative hrp/hrc protein | ALQ22_01866 | Not Available | Positive | 420977 - 421951 | 35324.1 |
| type iii secretion system cytoplasmic atpase | ALQ22_01867 | Not Available | Positive | 421948 - 423297 | 48373.4 |
| type iii secretion system protein | ALQ22_01868 | Not Available | Positive | 423300 - 423746 | 17382.5 |
| type iii secretion system protein | ALQ22_01869 | Not Available | Positive | 423747 - 424325 | 20660.5 |
| type iii secretion system protein | ALQ22_01870 | Not Available | Positive | 424322 - 425038 | 26059.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.







