Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas savastanoi |
| Strain | pv. retacarpa strain ICMP 16946 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 28 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Retama sphaerocarpa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1199582 bp
Thymine Count
1199844 bp
Guanine Count
1660800 bp
Cytosine Count
1655145 bp
Genome Length
5771807 bp
Protein-coding Genes
5335 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate synthase | ALQ22_03140 | Not Available | Positive | 4093454 - 4093939 | 17113.8 |
| alcohol dehydrogenase | ALQ22_03141 | Not Available | Positive | 4093950 - 4095116 | 41846.0 |
| hypothetical protein | ALQ22_03142 | Not Available | Positive | 4095113 - 4096372 | 44786.5 |
| sodium/solute symporter | ALQ22_03143 | Not Available | Positive | 4097478 - 4098893 | 50657.0 |
| glycosyl hydrolase, family 43 | ALQ22_03144 | Not Available | Positive | 4098880 - 4100004 | 41593.6 |
| oxidoreductase, short chain dehydrogenase/reductase family | ALQ22_04849 | Not Available | Positive | 4100056 - 4100251 | 7052.5 |
| ispsy16 transposase | ALQ22_04470 | Not Available | Negative | 4101148 - 4101451 | 11316.5 |
| conjugal transfer protein | ALQ22_02348 | Not Available | Positive | 4101454 - 4102146 | 24396.3 |
| virb7 | ALQ22_02349 | Not Available | Positive | 4102094 - 4102492 | 13906.7 |
| relaxase | ALQ22_04549 | Not Available | Positive | 4103886 - 4104680 | 29886.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.







