Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas savastanoi |
| Strain | pv. retacarpa strain ICMP 16946 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 28 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Retama sphaerocarpa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1199582 bp
Thymine Count
1199844 bp
Guanine Count
1660800 bp
Cytosine Count
1655145 bp
Genome Length
5771807 bp
Protein-coding Genes
5335 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus bioproteinsis protein pile | ALQ22_03830 | Not Available | Negative | 3404876 - 3405277 | 14240.0 |
| putative type iv pilus-associated protein | ALQ22_05092 | Not Available | Negative | 3405289 - 3408486 | 113047.0 |
| type 4 fimbrial bioproteinsis protein pilx | ALQ22_03831 | Not Available | Negative | 3408473 - 3408955 | 16593.3 |
| type iv pilus assembly protein pilw | ALQ22_03832 | Not Available | Negative | 3408979 - 3409686 | 25660.0 |
| type 4 fimbrial bioproteinsis protein pilv | ALQ22_03833 | Not Available | Negative | 3409683 - 3410198 | 17594.5 |
| type 4 fimbrial bioproteinsis protein fimu | ALQ22_03834 | Not Available | Negative | 3410198 - 3410671 | 16424.0 |
| type 4 fimbrial bioproteinsis protein fimt | ALQ22_03835 | Not Available | Positive | 3410803 - 3411303 | 18006.7 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | ALQ22_101571 | Not Available | Negative | 3411310 - 3412284 | 35475.3 |
| peptidyl-prolyl cis-trans isomerase | ALQ22_03836 | Not Available | Negative | 3412334 - 3412810 | 17135.2 |
| lipoprotein signal peptidase | ALQ22_03837 | Not Available | Negative | 3412803 - 3413309 | 18835.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.







