Pseudomonas savastanoi pv. retacarpa strain ICMP 16946

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas savastanoi pv. retacarpa strain ICMP 16946 is a Gram-negative, rod-shaped bacterium that exists primarily as single cells and exhibits aerobic metabolism as a heterotroph. This strain has been identified in multiple habitats, indicating its versatile ecological adaptability. As a member of the Pseudomonas genus, this bacterium is likely to be involved in various biochemical processes within its environments, potentially contributing to nutrient cycling and organic matter decomposition. Its aerobic nature suggests that it thrives in oxygen-rich conditions, which may influence its distribution in soil and plant-associated habitats. The ability to utilize a range of organic compounds as energy sources further underscores its adaptability and role in diverse ecological niches. Notably, the isolation of strain ICMP 16946 in particular environments may reflect its capacity to respond to varying ecological pressures, such as nutrient availability or competition with other microbial communities. This adaptability enhances our understanding of Pseudomonas savastanoi pv. retacarpa's potential ecological roles, emphasizing its importance in maintaining microbial diversity and function in its respective habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas savastanoi
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas savastanoi pv. retacarpa strain ICMP 16946
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas savastanoi pv. retacarpa strain ICMP 16946

Accession NumberRBQM00000000.1

Gene Summary

Adenine Count

1199582 bp

Thymine Count

1199844 bp

Guanine Count

1660800 bp

Cytosine Count

1655145 bp

Genome Length

5771807 bp

Protein-coding Genes

5335 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Putative tail fiber assembly proteinALQ22_101110Not Available+235819 - 23633119192.8
Glycoside hydrolase family 19 proteinALQ22_03789Not Available+236672 - 23713016896.1
RzALQ22_03790Not Available+237127 - 23763618323.7
Putative prophage integraseALQ22_03791Not Available+238231 - 23940945136.3
AttrNot AvailableNot Available+240073 - 240084Not Available
Hypothetical proteinALQ22_02885Not Available+1570814 - 157117313280.0
Hypothetical proteinALQ22_02886Not Available+1571164 - 157155915034.7
Gp1ALQ22_02887Not Available+1571726 - 157221117333.0
Gp2, phage terminase, large subunit, putativeALQ22_02888Not Available+1572212 - 157394565118.2
Portal proteinALQ22_05204Not Available+1574345 - 157542739292.9

Displaying genes 21 – 30 of 5413 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites