Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas savastanoi |
| Strain | pv. retacarpa strain ICMP 16946 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 28 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Retama sphaerocarpa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1199582 bp
Thymine Count
1199844 bp
Guanine Count
1660800 bp
Cytosine Count
1655145 bp
Genome Length
5771807 bp
Protein-coding Genes
5335 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycolate dehydrogenase, subunit glcd | ALQ22_02375 | Not Available | Negative | 1285011 - 1286609 | 57268.6 |
| maleylacetoacetate isomerase / glutathione s-transferase | ALQ22_02376 | Not Available | Positive | 1286670 - 1287305 | 23566.2 |
| 4-hydroxyphenylpyruvate dioxygenase | ALQ22_02377 | Not Available | Positive | 1287450 - 1288526 | 40155.0 |
| sensory box/ggdef protein | ALQ22_02378 | Not Available | Negative | 1288585 - 1290783 | 81754.6 |
| hypothetical protein | ALQ22_100789 | Not Available | Negative | 1290780 - 1290917 | 5151.02 |
| ggdef domain protein | ALQ22_02379 | Not Available | Positive | 1291140 - 1292333 | 43739.6 |
| transcriptional regulator, iclr family | ALQ22_02380 | Not Available | Negative | 1292710 - 1293501 | 27834.7 |
| homogentisate 1,2-dioxygenase | ALQ22_02381 | Not Available | Positive | 1293640 - 1294947 | 48463.5 |
| fumarylacetoacetase | ALQ22_100326 | Not Available | Positive | 1294944 - 1296239 | 46409.4 |
| transcriptional regulator, tetr family | ALQ22_02382 | Not Available | Negative | 1296258 - 1296872 | 23238.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.







