Pseudomonas syringae pv. delphinii strain ICMP 4330

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae pv. delphinii strain ICMP 4330 is a notable bacterial pathogen characterized by its single replicon. This strain is part of the Pseudomonas syringae species, which is known for its role as a plant pathogen, particularly in affecting various crops and ornamental plants. The genomic information for this strain is accessible under the accession number RBQG00000000.1, indicating its availability for further scientific research and analysis. Pseudomonas syringae pv. delphinii specifically targets plants, leading to significant agricultural implications. The single replicon feature suggests a streamlined genetic structure, which can affect its adaptability and pathogenicity. Understanding the genetic composition of this strain could provide insights into its mechanisms of infection, virulence factors, and potential resistance strategies. Ecologically, Pseudomonas syringae pv. delphinii plays a role in the dynamics of plant-microbe interactions. Its pathogenicity can influence plant health, yield, and biodiversity within agricultural systems. By studying this strain, researchers aim to develop effective management strategies to mitigate its impact on crops, highlighting the importance of microbial research in sustainable agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae group genomosp. 3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas syringae pv. delphinii strain ICMP 4330
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas syringae pv. delphinii strain ICMP 4330

Gene Summary

Adenine Count

1287023 bp

Thymine Count

1276505 bp

Guanine Count

1814914 bp

Cytosine Count

1821105 bp

Genome Length

6222197 bp

Protein-coding Genes

5154 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rhs proteinALQ28_01610Not AvailablePositive851956 - 85256122844.5
hypothetical proteinALQ28_04356Not AvailablePositive852270 - 85289824382.2
proteinral secretion pathway protein nALQ28_03174Not AvailablePositive852899 - 85339717583.2
type ii and iii secretion system proteinALQ28_03175Not AvailablePositive853397 - 85572482361.2
phospholipase/carboxylesterase proteinALQ28_03176Not AvailablePositive855800 - 85652226136.2
hypothetical proteinALQ28_103803Not AvailablePositive857373 - 8575285691.53
major facilitator family transporterALQ28_03177Not AvailableNegative857783 - 85897942137.5
atp binding proteinALQ28_101031Not AvailablePositive859194 - 86058551643.1
hypothetical proteinALQ28_04798Not AvailableNegative861262 - 864300110744.0
efflux transporter, rnd family, mfp subunitALQ28_03179Not AvailableNegative864297 - 86539739965.6

Displaying genes 801 – 810 of 5262 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.