Pseudomonas syringae pv. delphinii strain ICMP 4330

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae pv. delphinii strain ICMP 4330 is a notable bacterial pathogen characterized by its single replicon. This strain is part of the Pseudomonas syringae species, which is known for its role as a plant pathogen, particularly in affecting various crops and ornamental plants. The genomic information for this strain is accessible under the accession number RBQG00000000.1, indicating its availability for further scientific research and analysis. Pseudomonas syringae pv. delphinii specifically targets plants, leading to significant agricultural implications. The single replicon feature suggests a streamlined genetic structure, which can affect its adaptability and pathogenicity. Understanding the genetic composition of this strain could provide insights into its mechanisms of infection, virulence factors, and potential resistance strategies. Ecologically, Pseudomonas syringae pv. delphinii plays a role in the dynamics of plant-microbe interactions. Its pathogenicity can influence plant health, yield, and biodiversity within agricultural systems. By studying this strain, researchers aim to develop effective management strategies to mitigate its impact on crops, highlighting the importance of microbial research in sustainable agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae group genomosp. 3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas syringae pv. delphinii strain ICMP 4330
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas syringae pv. delphinii strain ICMP 4330

Gene Summary

Adenine Count

1287023 bp

Thymine Count

1276505 bp

Guanine Count

1814914 bp

Cytosine Count

1821105 bp

Genome Length

6222197 bp

Protein-coding Genes

5154 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dipeptide abc transporter substrate-binding proteinALQ28_02958Not AvailablePositive4358134 - 435972659217.3
putative glycine-glutamate dipeptide porin opdpALQ28_101295Not AvailablePositive4359869 - 436125751185.0
dipeptide abc transporter, periplasmic dipeptide-binding proteinALQ28_02959Not AvailablePositive4361340 - 436293559249.6
peptide abc transporter permeaseALQ28_02960Not AvailablePositive4363010 - 436402036918.3
dipeptide abc transporter permeaseALQ28_02961Not AvailablePositive4364031 - 436494232581.8
lysr family transcriptional regulatorALQ28_02151Not AvailableNegative4365462 - 436641234128.9
diguanylate cyeALQ28_02152Not AvailableNegative4366532 - 436759039304.3
dienelactone hydrolase proteinALQ28_02153Not AvailablePositive4367805 - 436869232276.2
fad-binding oxidoreductaseALQ28_04510Not AvailableNegative4368784 - 437071871510.5
oxidoreductase, fad-binding proteinALQ28_04512Not AvailableNegative4370436 - 437128431340.8

Displaying genes 3741 – 3750 of 5262 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.