Pseudomonas syringae pv. delphinii strain ICMP 4330

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae pv. delphinii strain ICMP 4330 is a notable bacterial pathogen characterized by its single replicon. This strain is part of the Pseudomonas syringae species, which is known for its role as a plant pathogen, particularly in affecting various crops and ornamental plants. The genomic information for this strain is accessible under the accession number RBQG00000000.1, indicating its availability for further scientific research and analysis. Pseudomonas syringae pv. delphinii specifically targets plants, leading to significant agricultural implications. The single replicon feature suggests a streamlined genetic structure, which can affect its adaptability and pathogenicity. Understanding the genetic composition of this strain could provide insights into its mechanisms of infection, virulence factors, and potential resistance strategies. Ecologically, Pseudomonas syringae pv. delphinii plays a role in the dynamics of plant-microbe interactions. Its pathogenicity can influence plant health, yield, and biodiversity within agricultural systems. By studying this strain, researchers aim to develop effective management strategies to mitigate its impact on crops, highlighting the importance of microbial research in sustainable agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae group genomosp. 3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas syringae pv. delphinii strain ICMP 4330
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas syringae pv. delphinii strain ICMP 4330

Gene Summary

Adenine Count

1287023 bp

Thymine Count

1276505 bp

Guanine Count

1814914 bp

Cytosine Count

1821105 bp

Genome Length

6222197 bp

Protein-coding Genes

5154 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alkylhydroperoxidase ahpd domain-containing proteinALQ28_00368Not AvailableNegative4274675 - 427526521632.7
hypothetical proteinALQ28_00369Not AvailableNegative4275265 - 427578618548.1
peptide abc transporter substrate-binding proteinALQ28_00370Not AvailableNegative4275858 - 427742356772.3
oligopeptide/dipeptide abc transporter atp-binding protein-like proteinALQ28_00371Not AvailableNegative4277475 - 427848837213.0
binding-protein-dependent transport (system) inner membrane componentALQ28_00372Not AvailableNegative4279488 - 428040833105.6
peptide abc transporter permeaseALQ28_00373Not AvailableNegative4280405 - 428137936027.7
hypothetical proteinALQ28_02145Not AvailableNegative4283511 - 428390314092.5
spovr proteinALQ28_102002Not AvailablePositive4284790 - 428540724031.4
multifunctional cca proteinALQ28_02655Not AvailablePositive4285505 - 428673445886.9
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinaseALQ28_04632Not AvailableNegative4287037 - 428772024862.0

Displaying genes 3671 – 3680 of 5262 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.