Pseudomonas syringae pv. delphinii strain ICMP 4330

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae pv. delphinii strain ICMP 4330 is a notable bacterial pathogen characterized by its single replicon. This strain is part of the Pseudomonas syringae species, which is known for its role as a plant pathogen, particularly in affecting various crops and ornamental plants. The genomic information for this strain is accessible under the accession number RBQG00000000.1, indicating its availability for further scientific research and analysis. Pseudomonas syringae pv. delphinii specifically targets plants, leading to significant agricultural implications. The single replicon feature suggests a streamlined genetic structure, which can affect its adaptability and pathogenicity. Understanding the genetic composition of this strain could provide insights into its mechanisms of infection, virulence factors, and potential resistance strategies. Ecologically, Pseudomonas syringae pv. delphinii plays a role in the dynamics of plant-microbe interactions. Its pathogenicity can influence plant health, yield, and biodiversity within agricultural systems. By studying this strain, researchers aim to develop effective management strategies to mitigate its impact on crops, highlighting the importance of microbial research in sustainable agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae group genomosp. 3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas syringae pv. delphinii strain ICMP 4330
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas syringae pv. delphinii strain ICMP 4330

Gene Summary

Adenine Count

1287023 bp

Thymine Count

1276505 bp

Guanine Count

1814914 bp

Cytosine Count

1821105 bp

Genome Length

6222197 bp

Protein-coding Genes

5154 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pts-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit dhakALQ28_00203Not AvailablePositive2702548 - 270354935123.4
dihydroxyacetone kinase subunit dhalALQ28_00204Not AvailablePositive2703553 - 270420322640.1
iron-sulfur cluster-binding protein, rieske familyALQ28_03971Not AvailableNegative2704216 - 270555649918.6
auxin-responsive gh3-related proteinALQ28_00206Not AvailableNegative2705277 - 270606527682.4
rhs element vgr proteinALQ28_04556Not AvailableNegative2706087 - 27063449804.75
luciferase proteinALQ28_03776Not AvailableNegative2706681 - 270771838942.7
hypothetical proteinALQ28_03777Not AvailableNegative2707928 - 270826311886.4
bacterial luciferase proteinALQ28_03778Not AvailablePositive2708587 - 270968740533.9
diguanylate cyeALQ28_100192Not AvailablePositive2709869 - 271159663919.4
aliphatic isothiocyanate resistance protein saxgALQ28_04933Not AvailableNegative2711626 - 271213818081.9

Displaying genes 2321 – 2330 of 5262 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.