Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. morsprunorum strain ICMP 3897 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Prunus, Prunus avium |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1265154 bp
Thymine Count
1266662 bp
Guanine Count
1758869 bp
Cytosine Count
1755394 bp
Genome Length
6062753 bp
Protein-coding Genes
5637 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome-binding atpase ychf | ALQ31_06250 | Not Available | Negative | 840778 - 841878 | 40054.1 |
| peptidyl-trna hydrolase | ALQ31_05135 | Not Available | Negative | 841900 - 842484 | 20966.3 |
| 50s ribosomal protein l25 | ALQ31_05136 | Not Available | Negative | 842649 - 843260 | 21872.3 |
| ribose-phosphate pyrophosphokinase | ALQ31_05137 | Not Available | Negative | 843385 - 844317 | 33803.8 |
| Trna-gln | Not Available | Not Available | Positive | 844372 - 844446 | Not Available |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | ALQ31_05138 | Not Available | Negative | 844484 - 845356 | 31420.2 |
| outer-membrane lipoprotein lolb | ALQ31_05139 | Not Available | Negative | 845353 - 845970 | 22903.3 |
| tetratricopeptide repeat-containing protein | ALQ31_05140 | Not Available | Negative | 845975 - 847645 | 62147.3 |
| glutamyl-trna reductase | ALQ31_05141 | Not Available | Positive | 847929 - 849206 | 46123.4 |
| peptide chain release factor 1 | ALQ31_06251 | Not Available | Positive | 849203 - 850285 | 40084.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Canker disease | Causes | PMC3723570 |
| Bacterial canker | Causes | PMC10747947 |
| Bacterial canker | Causes | PMC9343901 |








