Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. morsprunorum strain ICMP 3897 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Prunus, Prunus avium |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1265154 bp
Thymine Count
1266662 bp
Guanine Count
1758869 bp
Cytosine Count
1755394 bp
Genome Length
6062753 bp
Protein-coding Genes
5637 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-polyprenyl-6-methoxyphenol 4-hydroxylase | ALQ31_04923 | Not Available | Positive | 683419 - 684606 | 43233.5 |
| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | ALQ31_04924 | Not Available | Positive | 684652 - 685896 | 45732.1 |
| syringolide biosynthetic protein avrd1 | ALQ31_01324 | Not Available | Negative | 686319 - 687254 | 34486.2 |
| lipoprotein, nlpa family | ALQ31_01464 | Not Available | Negative | 687487 - 688269 | 28234.2 |
| sigma-54-binding protein | ALQ31_01465 | Not Available | Negative | 688440 - 689390 | 34497.1 |
| hypothetical protein | ALQ31_01466 | Not Available | Negative | 689470 - 690051 | 21906.9 |
| major facilitator superfamily transporter phthalate permease | ALQ31_01467 | Not Available | Negative | 690266 - 691549 | 46002.5 |
| helix-turn-helix, arac type | ALQ31_01468 | Not Available | Positive | 692185 - 693177 | 36744.5 |
| levansucrase | ALQ31_01540 | Not Available | Positive | 693213 - 693365 | 5641.59 |
| yngk protein | ALQ31_01541 | Not Available | Positive | 693400 - 694635 | 45900.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Canker disease | Causes | PMC3723570 |
| Bacterial canker | Causes | PMC10747947 |
| Bacterial canker | Causes | PMC9343901 |








