Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. morsprunorum strain ICMP 3897 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Prunus, Prunus avium |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1265154 bp
Thymine Count
1266662 bp
Guanine Count
1758869 bp
Cytosine Count
1755394 bp
Genome Length
6062753 bp
Protein-coding Genes
5637 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| poly polymerase | ALQ31_03720 | Not Available | Negative | 600041 - 601726 | 62923.7 |
| poly depolymerase | ALQ31_03721 | Not Available | Negative | 601883 - 602740 | 31636.8 |
| pha-synthase 1 | ALQ31_03722 | Not Available | Negative | 602804 - 604483 | 62379.4 |
| hypothetical protein | ALQ31_03723 | Not Available | Negative | 604796 - 605182 | 14598.6 |
| atp-dependent protease atpase subunit hslu | ALQ31_06012 | Not Available | Negative | 605268 - 606611 | 50130.4 |
| atp-dependent protease subunit hslv | ALQ31_03725 | Not Available | Negative | 606672 - 607202 | 18797.6 |
| sporulation related repeat protein | ALQ31_06013 | Not Available | Negative | 607556 - 608251 | 24643.8 |
| arginine--trna ligase | ALQ31_03727 | Not Available | Negative | 608253 - 609989 | 63531.9 |
| primosome assembly protein pria | ALQ31_06014 | Not Available | Negative | 610087 - 612411 | 85407.3 |
| 50s ribosomal protein l31 | ALQ31_03729 | Not Available | Positive | 612476 - 612697 | 7880.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Canker disease | Causes | PMC3723570 |
| Bacterial canker | Causes | PMC10747947 |
| Bacterial canker | Causes | PMC9343901 |








