Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. morsprunorum strain ICMP 3897 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Prunus, Prunus avium |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1265154 bp
Thymine Count
1266662 bp
Guanine Count
1758869 bp
Cytosine Count
1755394 bp
Genome Length
6062753 bp
Protein-coding Genes
5637 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type sugar transport system, periplasmic component | ALQ31_00006 | Not Available | Negative | 489597 - 490883 | 45791.6 |
| signal transduction histidine kinase | ALQ31_00007 | Not Available | Negative | 491053 - 492471 | 52861.2 |
| dna-binding response regulator gltr | ALQ31_00008 | Not Available | Negative | 492521 - 493258 | 27674.2 |
| glucokinase | ALQ31_00009 | Not Available | Negative | 493309 - 494274 | 34302.5 |
| phosphogluconate dehydratase | ALQ31_05347 | Not Available | Negative | 494271 - 496097 | 65340.9 |
| glyceraldehyde-3-phosphate dehydrogenase, type i | ALQ31_00011 | Not Available | Positive | 496317 - 497318 | 36241.2 |
| rna polymerase sigma-70 protein | ALQ31_00012 | Not Available | Positive | 497387 - 497950 | 21043.6 |
| putative regulatory protein | ALQ31_00013 | Not Available | Positive | 498010 - 498975 | 35516.2 |
| tonb-dependent outer membrane heme receptor | ALQ31_00014 | Not Available | Positive | 499097 - 501676 | 93837.4 |
| heme oxygenase hemo, associated with heme uptake | ALQ31_00015 | Not Available | Positive | 501793 - 502407 | 22086.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Canker disease | Causes | PMC3723570 |
| Bacterial canker | Causes | PMC10747947 |
| Bacterial canker | Causes | PMC9343901 |








