Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. morsprunorum strain ICMP 3897 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Prunus, Prunus avium |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1265154 bp
Thymine Count
1266662 bp
Guanine Count
1758869 bp
Cytosine Count
1755394 bp
Genome Length
6062753 bp
Protein-coding Genes
5637 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ31_100112 | Not Available | Positive | 473275 - 473412 | 5190.29 |
| arabinose 5-phosphate isomerase | ALQ31_05179 | Not Available | Positive | 473570 - 474544 | 34505.1 |
| yrbi family phosphatase | ALQ31_05180 | Not Available | Positive | 474544 - 475083 | 19478.6 |
| hypothetical protein | ALQ31_05181 | Not Available | Positive | 475092 - 475664 | 21417.5 |
| osta protein | ALQ31_05182 | Not Available | Positive | 475651 - 476199 | 19682.6 |
| abc transporter, atp-binding protein | ALQ31_05183 | Not Available | Positive | 476200 - 476925 | 26500.2 |
| rna polymerase sigma-54 factor | ALQ31_05184 | Not Available | Positive | 477132 - 478601 | 55800.9 |
| ribosomal subunit interface protein raia/yfia | ALQ31_05185 | Not Available | Positive | 478677 - 478985 | 11610.2 |
| pts iia-like nitrogen-regulatory protein ptsn | ALQ31_05186 | Not Available | Positive | 478997 - 479461 | 16566.2 |
| nucleotide-binding protein | ALQ31_05187 | Not Available | Positive | 479464 - 480321 | 32254.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Canker disease | Causes | PMC3723570 |
| Bacterial canker | Causes | PMC10747947 |
| Bacterial canker | Causes | PMC9343901 |








