Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. morsprunorum strain ICMP 3897 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Prunus, Prunus avium |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1265154 bp
Thymine Count
1266662 bp
Guanine Count
1758869 bp
Cytosine Count
1755394 bp
Genome Length
6062753 bp
Protein-coding Genes
5637 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer-membrane lipoprotein carrier protein | ALQ31_03631 | Not Available | Negative | 423460 - 424083 | 22882.6 |
| cell division protein ftsk | ALQ31_03632 | Not Available | Negative | 424160 - 426565 | 87587.7 |
| hypothetical protein | ALQ31_100449 | Not Available | Positive | 426718 - 426993 | 10379.5 |
| leucyl/phenylalanyl-trna--protein transferase | ALQ31_03633 | Not Available | Positive | 427034 - 427723 | 25952.7 |
| putative arginyl-trna--protein transferase | ALQ31_03634 | Not Available | Positive | 427772 - 428479 | 27839.2 |
| translation initiation factor if-1 | ALQ31_03635 | Not Available | Positive | 428581 - 428799 | 8303.06 |
| atp-dependent clp protease, atp-binding subunit clpa | ALQ31_03636 | Not Available | Negative | 428916 - 431189 | 83536.9 |
| atp-dependent clp protease adapter protein clps | ALQ31_03637 | Not Available | Negative | 431220 - 431582 | 13559.2 |
| cold shock domain-containing protein cspd | ALQ31_03638 | Not Available | Positive | 431796 - 432080 | 10239.2 |
| isocitrate dehydrogenase | ALQ31_03639 | Not Available | Positive | 432646 - 434877 | 81024.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Canker disease | Causes | PMC3723570 |
| Bacterial canker | Causes | PMC10747947 |
| Bacterial canker | Causes | PMC9343901 |








