Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. morsprunorum strain ICMP 3897 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Prunus, Prunus avium |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1265154 bp
Thymine Count
1266662 bp
Guanine Count
1758869 bp
Cytosine Count
1755394 bp
Genome Length
6062753 bp
Protein-coding Genes
5637 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ31_05903 | Not Available | Positive | 375923 - 376174 | 9033.82 |
| bacteriocin | ALQ31_03185 | Not Available | Positive | 376204 - 376599 | 15216.7 |
| hypothetical protein | ALQ31_03186 | Not Available | Positive | 376577 - 377029 | 17141.3 |
| hypothetical protein | ALQ31_03187 | Not Available | Negative | 377147 - 377551 | 15067.1 |
| Trna-ser | Not Available | Not Available | Positive | 377776 - 377865 | Not Available |
| 3-ketoacyl- reductase | ALQ31_03188 | Not Available | Negative | 378044 - 378166 | 4085.76 |
| isochorismatase protein | ALQ31_03189 | Not Available | Positive | 378263 - 378829 | 20593.2 |
| snf2-related:helicase | ALQ31_05905 | Not Available | Negative | 378843 - 381587 | 104055.0 |
| hypothetical protein | ALQ31_03191 | Not Available | Negative | 381662 - 382186 | 19265.2 |
| transcription-repair-coupling factor | ALQ31_05907 | Not Available | Negative | 382198 - 385788 | 134245.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Canker disease | Causes | PMC3723570 |
| Bacterial canker | Causes | PMC10747947 |
| Bacterial canker | Causes | PMC9343901 |








