Pseudomonas amygdali pv. morsprunorum strain ICMP 3897

RodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas amygdali pv. morsprunorum strain ICMP 3897 is a Gram-negative, rod-shaped bacterium known for its mobility. This strain is particularly notable for its pathogenicity, as it is associated with canker disease and bacterial canker in host plants, specifically within the genus Prunus, including Prunus avium. The bacterium has a single replicon, which is relevant for its genetic stability and replication within host environments. Given its mobility, P. amygdali pv. morsprunorum strain ICMP 3897 can effectively spread within its host plants, facilitating infection and disease progression. This mobility is a critical factor in the epidemiology of bacterial canker, as it allows the pathogen to colonize new tissues and potentially infect neighboring plants. Understanding the characteristics of this strain is essential for managing the diseases it causes. The association with Prunus species, particularly Prunus avium, highlights the importance of monitoring and controlling this pathogen in agricultural settings where these trees are cultivated. Effective disease management strategies could mitigate the impact of bacterial canker, thereby protecting crop yields and maintaining the health of Prunus populations. The strain's accession number, RBQD00000000.1, provides a reference for further research and characterization, facilitating ongoing studies into its biology and ecology within the context of plant health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas amygdali
Strainpv. morsprunorum strain ICMP 3897

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas amygdali pv. morsprunorum strain ICMP 3897
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Prunus, Prunus avium
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas amygdali pv. morsprunorum strain ICMP 3897

Gene Summary

Adenine Count

1265154 bp

Thymine Count

1266662 bp

Guanine Count

1758869 bp

Cytosine Count

1755394 bp

Genome Length

6062753 bp

Protein-coding Genes

5637 genes

Non-Coding Genes

201 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Putative baseplate assembly protein wALQ31_01505Not AvailablePositive2000425 - 200075112069.7
Baseplate assembly proteinALQ31_01506Not AvailablePositive2000748 - 200162931840.8
Tail protein iALQ31_01507Not AvailablePositive2001631 - 200223622488.8
Tail fiber proteinALQ31_01508Not AvailablePositive2002233 - 200385556384.7
Tail proteinALQ31_01509Not AvailablePositive2003856 - 200428716054.5
Tail sheath proteinALQ31_01510Not AvailablePositive2004363 - 200552641843.6
Tail proteinALQ31_01511Not AvailablePositive2005539 - 200604818507.5
Hypothetical proteinALQ31_01512Not AvailablePositive2006065 - 200636711146.2
Tail length tape measure proteinALQ31_05579Not AvailablePositive2006503 - 200924494417.5
Putative tail proteinALQ31_05580Not AvailablePositive2009254 - 201009929927.8

Displaying genes 21 – 30 of 5838 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Canker diseaseCausesPMC3723570
Bacterial cankerCausesPMC10747947
Bacterial cankerCausesPMC9343901

Displaying health effects 1 – 3 of 3 in total