Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. morsprunorum strain ICMP 3897 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Prunus, Prunus avium |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1265154 bp
Thymine Count
1266662 bp
Guanine Count
1758869 bp
Cytosine Count
1755394 bp
Genome Length
6062753 bp
Protein-coding Genes
5637 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative baseplate assembly protein w | ALQ31_01505 | Not Available | Positive | 2000425 - 2000751 | 12069.7 |
| Baseplate assembly protein | ALQ31_01506 | Not Available | Positive | 2000748 - 2001629 | 31840.8 |
| Tail protein i | ALQ31_01507 | Not Available | Positive | 2001631 - 2002236 | 22488.8 |
| Tail fiber protein | ALQ31_01508 | Not Available | Positive | 2002233 - 2003855 | 56384.7 |
| Tail protein | ALQ31_01509 | Not Available | Positive | 2003856 - 2004287 | 16054.5 |
| Tail sheath protein | ALQ31_01510 | Not Available | Positive | 2004363 - 2005526 | 41843.6 |
| Tail protein | ALQ31_01511 | Not Available | Positive | 2005539 - 2006048 | 18507.5 |
| Hypothetical protein | ALQ31_01512 | Not Available | Positive | 2006065 - 2006367 | 11146.2 |
| Tail length tape measure protein | ALQ31_05579 | Not Available | Positive | 2006503 - 2009244 | 94417.5 |
| Putative tail protein | ALQ31_05580 | Not Available | Positive | 2009254 - 2010099 | 29927.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Canker disease | Causes | PMC3723570 |
| Bacterial canker | Causes | PMC10747947 |
| Bacterial canker | Causes | PMC9343901 |








